iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111258

Ensembl Protein ID

Solyc06g071120.2.1

UniProt Accession

K4C8I5; K4C8I5_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g071120.2	Solyc06g071120.2.1	Solyc06g071120.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.70e-23	84.1	1305	1633

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNl..gNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw....kskkkavsprellkalkkeaee 83
           tGlkN      C++N ++Q+L++++++r+++l++ +++ ++      + +++++l ++f++l     + +++a++p++l  al+++ ++
   Q: 1305 TGLKNEvgEYNCFLNVIIQSLWHLRQFRDDFLRRSSSEHDHV----GDPCVVCALYDIFTALNtastEMQREAIAPTSLRIALSNLYPN 1389
           58888733347**********************666555554....57899999999999997666688899*******9999998877 PP
   S: 84   ...fsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsde.aeekkkkknkslisdlFqgqlksqikclecdnvssreep 168
              f++ + +D++E+l +++d l++++++       ++ ++d ++++++   + + +++ ++++ lF++ + +++ c +c+ +s r+ +
   Q: 1390 snfFQEAQMNDSSEVLGVIFDCLHRSFTS-------TLGGSDAESADSScTGSWDCTSSACTVHSLFGMDIFERMNCYNCGLES-RHLK 1470
           4557799********************33.......333444333333325667889999*********************998.6667 PP
   S: 169  fldlslpvpgkeetkke......slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekink 251
            +++  +++ +  + ++      s++++L+    +++l ++   +   c+k+      + l+  P++++  L + +  e+ +  +   +
   Q: 1471 YTSFFHNINASALRTMKvmcpesSFDELLNLVEMNHQLACD--PEVGGCEKLN--YIHHILSAPPHIFTTVLGWQNTCEDVDDIKATLS 1555
           88899999977776655777777999999999999999986..5667777666..34577999999******99966555333333333 PP
   S: 252  kvefpleLdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvkn.ekgkWllfdDskVtevk.eeevleetg...staYvlf 334
            ++   e+d+           + k+k  L++vv+++G     HY++++++ ++g+W+ +dD++V+++  +++vl +++    ++ vlf
   Q: 1556 ALS--TEVDIGVLYRG----LDPKNKHCLTSVVCYYG----QHYHCFAYShDRGQWIMYDDKTVKVIGgWDDVLVMCErghLQPQVLF 1633
           333..44777643333....2337899**********....9******9945566***********9547888876665555555555 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MGHKKRTVAP RSKPLSSPAA VSEDGSPPSI DADLKLVSTI PSITNGSLSR NDALAVNDYE 60
NSTSSSSASY ASIKLECERA LTSLRRGNHT KALRLMKDLS TKHENSPHSA LIHRVQGTVC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTTCACGAG AGTGACACTA TCCATACGTA GTTCCCTATA CATATTTATA ATTATTACAC 60
TCTATTCCTC TCCGATCGAT TGTTTTTCCG ATTCCGACGT TGCTTTCTTC GCCGGTAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006866--DUF627_N
IPR006865--DUF629
IPR001394--Peptidase_C19_UCH
IPR011990--TPR-like_helical_dom
IPR028889--USP_dom
IPR013087--Znf_C2H2_type

PROSITE

PS50235--USP_3
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF04781--DUF627
PF04780--DUF629
PF00443--UCH

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination

KEGG

sly:101248307

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000820	Aegilops tauschii	52.56	4.00e-63	234.00
IUUC-Atr-002451	Amborella trichopoda	48.39	0.00e+00	854.00
IUUC-Aly-005468	Arabidopsis lyrata	55.77	0.00e+00	1564.00
IUUC-Ath-006682	Arabidopsis thaliana	55.45	0.00e+00	1640.00
IUUC-Bdi-015058	Brachypodium distachyon	42.46	0.00e+00	1074.00
IUUC-Bol-015670	Brassica oleracea	70.96	1.00e-152	533.00
IUUC-Bra-016731	Brassica rapa	53.92	0.00e+00	1577.00
IUUC-Dre-028046	Danio rerio	33.24	2.00e-39	157.00
IUUC-Gma-043273	Glycine max	56.38	0.00e+00	1646.00
IUUC-Hvu-047657	Hordeum vulgare	55.91	2.00e-147	516.00
IUUC-Lpe-051572	Leersia perrieri	40.58	0.00e+00	957.00
IUUC-Mtr-058682	Medicago truncatula	53.63	0.00e+00	1553.00
IUUC-Mac-064469	Musa acuminata	48.37	2.00e-178	619.00
IUUC-Opr-070676	Ochotona princeps	28.91	4.00e-18	87.00
IUUC-Oba-075174	Oryza barthii	61.36	1.00e-132	467.00
IUUC-Obr-076268	Oryza brachyantha	58.74	2.00e-147	516.00
IUUC-Ogl-077138	Oryza glaberrima	60.81	2.00e-149	523.00
IUUC-Ogu-078705	Oryza glumaepatula	61.10	3.00e-132	466.00
IUUC-Oin-079125	Oryza indica	60.57	3.00e-149	522.00
IUUC-Olo-080872	Oryza longistaminata	56.77	2.00e-133	469.00
IUUC-Ome-081864	Oryza meridionalis	56.77	2.00e-132	467.00
IUUC-Oni-082109	Oryza nivara	61.10	2.00e-132	466.00
IUUC-Opu-083823	Oryza punctata	58.37	1.00e-147	517.00
IUUC-Oru-084310	Oryza rufipogon	61.10	2.00e-132	466.00
IUUC-Osa-085583	Oryza sativa	60.71	8.00e-148	516.00
IUUC-Ppa-095930	Physcomitrella patens	36.76	1.00e-152	533.00
IUUC-Pop-099539	Populus trichocarpa	59.67	0.00e+00	1737.00
IUUC-Ppe-101918	Prunus persica	61.88	0.00e+00	1845.00
IUUC-Sit-110021	Setaria italica	56.29	3.00e-147	515.00
IUUC-Stu-112904	Solanum tuberosum	96.64	0.00e+00	3044.00
IUUC-Sbi-114345	Sorghum bicolor	43.63	0.00e+00	1123.00
IUUC-Tca-121692	Theobroma cacao	64.83	0.00e+00	1919.00
IUUC-Tae-125619	Triticum aestivum	38.13	1.00e-148	520.00
IUUC-Tur-126027	Triticum urartu	55.60	5.00e-147	515.00
IUUC-Vvi-131652	Vitis vinifera	63.25	0.00e+00	1880.00
IUUC-Xtr-131831	Xenopus tropicalis	32.36	2.00e-40	161.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence