iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000788

Ensembl Protein ID

EMT16976

UniProt Accession

N1QZG4; N1QZG4_AEGTA

Genbank Protein ID

EMT16976.1

Protein Name

RING-H2 finger protein ATL3F

Genbank Nucleotide ID

KD535990

Gene Name

F775_02284

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_02284	EMT16976	EMT16976

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-07	32.5	110	152

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C ++++dg    ++ +CgH fha+C+ +w       + +++CPlCr
   Q: 110  CAVCICELRDGdtgRRLPRCGHRFHAECVDRW------FRSHATCPLCR 152
           ********55444355555*************......**********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MARRWLTSDA SAPPPSQHSG WDVNRSAVKV AIVGNVVVVL LFFVAIVWRL FFSGRAQEGA 60
GGGGAVIAPS SGESSPCASP RAKGLRKEDL MSLPVYVHRA SAEDGGKVEC AVCICELRDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCAGGC GATGGCTCAC GTCGGACGCG AGCGCGCCCC CTCCGTCGCA GCATTCTGGG 60
TGGGACGTGA ACCGGTCGGC CGTGAAGGTT GCCATCGTCG GCAACGTGGT CGTCGTGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_02284

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014674	Brachypodium distachyon	64.67	1.00e-34	138.00
IUUC-Bra-018059	Brassica rapa	50.00	3.00e-20	91.30
IUUC-Ete-032541	Echinops telfairi	43.04	1.00e-13	70.50
IUUC-Hvu-047164	Hordeum vulgare	91.46	4.00e-64	236.00
IUUC-Lpe-050818	Leersia perrieri	55.00	2.00e-21	95.90
IUUC-Mac-064450	Musa acuminata	53.33	4.00e-21	93.20
IUUC-Oan-073236	Ornithorhynchus anatinus	38.46	6.00e-14	71.20
IUUC-Oba-075668	Oryza barthii	78.87	8.00e-25	105.00
IUUC-Obr-076402	Oryza brachyantha	53.62	1.00e-15	74.70
IUUC-Ogl-077667	Oryza glaberrima	78.87	7.00e-25	105.00
IUUC-Ogu-078113	Oryza glumaepatula	78.87	5.00e-25	106.00
IUUC-Oin-079444	Oryza indica	78.87	6.00e-25	106.00
IUUC-Ome-081633	Oryza meridionalis	55.56	2.00e-24	105.00
IUUC-Oni-082036	Oryza nivara	78.87	6.00e-25	106.00
IUUC-Opu-084104	Oryza punctata	57.26	3.00e-27	114.00
IUUC-Oru-084988	Oryza rufipogon	78.87	6.00e-25	106.00
IUUC-Osa-085900	Oryza sativa	78.87	6.00e-25	106.00
IUUC-Ppe-101773	Prunus persica	48.19	2.00e-19	88.60
IUUC-Stu-112903	Solanum tuberosum	43.04	2.00e-18	84.70
IUUC-Sbi-113860	Sorghum bicolor	52.76	4.00e-24	103.00
IUUC-Tca-121512	Theobroma cacao	46.05	8.00e-19	86.70
IUUC-Tae-122921	Triticum aestivum	100.00	9.00e-63	231.00
IUUC-Tur-126816	Triticum urartu	45.95	1.00e-21	94.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence