iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043117

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000844

Gene Name

LOC100819990; GLYMA_11G060400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA11G06420	GLYMA11G06420.2	GLYMA11G06420.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-28	97.9	210	247
UBD/Beta-Prp	2.20e-52	179.7	210	434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d ++cl++  d  l+ s+s+D+t kvW+++ +++l 
   Q: 210  HYDAISCLSLtEDhSLIYSASWDKTFKVWRTSNFKCLE 247
           8899******955689***************9999986 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw..dlstgkcvhtlk....gheds 96
           h + i+c+  ++d sl+ ++s+d+t kvw++++ k+l+s+  h+++v+a+    dg +  tgs D+t+k+w  +++   + h ++    ++e  
   Q: 210  HYDAISCLSLTEDHSLIYSASWDKTFKVWRTSNFKCLESVTAHDDAVNALVVGLDG-MVFTGSADGTVKIWrrEVQGKGTKHLFSqtllKQECA 302
           668899*************************************************9.9*************88777555555555455599*** PP
   S: 97   vlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl...ktgkllrtltgghtdsvysls 187
           v++l+++++g++l +Gs+d  ++ w  et+ + + +l+gh+ +v c+++ +  +l++sGs+D ++ +W+       +++  l+g ht++v++l+
   Q: 303  VTALAINEEGNVLYAGSSDGLVNYWVRETNLEHKGVLRGHKLAVLCLATAG--SLVFSGSADMAICVWKRslnDDHTCVNILSG-HTGPVKCLA 393
           *************************9999999988*************999..*****************8888889******9.********* PP
   S: 188  fdsng........kelvsgsldgtvklwdlqtgecvrtlngh 221
            +++           l sgsld++vk+w ++++    + n+h
   Q: 394  AERDPeamcnerrWILYSGSLDKSVKVWKVSEN-AASAHNNH 434
           6666666777776999**************765.45555555 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MTGSSRKGRG YLDEGSVNGR MYGKLKKDEF DGYNSDNHQR KNNPITMDAP HLDPQMEADN 60
APYDASLSPL SKSPWSSHMN EDAFAGSNEN DALVGSLVRE EGHIYSLAAT KDLLYTGSDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACAGGGT CATCTCGAAA AGGACGCGGA TACTTGGATG AAGGAAGTGT GAATGGAAGA 60
ATGTACGGAA AGTTAAAGAA AGACGAGTTC GACGGTTACA ACTCCGATAA CCATCAAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

gmx:100819990

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ome-081447	Oryza meridionalis	50.42	4.00e-95	341.00
IUUC-Pop-099710	Populus trichocarpa	69.35	8.00e-149	520.00
IUUC-Ppe-101450	Prunus persica	64.04	4.00e-167	580.00
IUUC-Tca-121487	Theobroma cacao	59.96	4.00e-157	548.00
IUUC-Vvi-131677	Vitis vinifera	70.86	4.00e-151	527.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence