iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057793

Ensembl Protein ID

KEH30356

UniProt Accession

A0A072ULX7; A0A072ULX7_MEDTR

Genbank Protein ID

KEH30356.1

Protein Name

Transducin/WD40 repeat protein

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g068457

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g068457	KEH30356	KEH30356

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-33	114.5	237	273
UBD/Beta-Prp	2.50e-44	153.1	129	399

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H d v++l++ ++ +ll sGs+D+t+kvW+++++++ 
   Q: 237  HFDAVSSLSLdQEeGLLYSGSWDKTLKVWRVTDFKCM 273
           8899******9778********************997 PP

UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls............................. 82
           + i+++++  ++++l tg +++ i+vw+  +      +++ ++ v+++ +s+    + tg++D+ i+vw +s                             
   Q: 129  GHIYSLAV--SGDMLYTGTDSKNIRVWKELKDY--TGFKSSSGLVKSIVISEGN--IFTGHQDGKIRVWKISsknsrnhkrigslptfkdyvkssmnpkny 223
           56777788..999**************988754..499**************94..99***********99999999*******************99999 PP
   S: 83   ....tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.......ktgkll 172
                +  ++++k h d v sls++++   l sGs+d+t++vw +   +c+e     hd++vn vv   ++ ++++Gs+D+tv++W+        kt+ +l
   Q: 224  vevrRRRNTVKVK-HFDAVSSLSLDQEEGLLYSGSWDKTLKVWRVTDFKCME-SIIAHDDAVNAVVAA-FQTYVFTGSADGTVKMWRRdtdgkgkKTKHVL 321
           9988788888888.**************************************.777888888877665.479**********************9888888 PP
   S: 173  rtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec...vrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
           ++   +++++v+ l+++++++ +  gs dg v++w+ q+++       l+gh+  v+++++   ++++ sgs+D+ + +W
   Q: 322  ERILLKQENAVTALTVNDSSTIIYCGSSDGLVNFWEHQQKNNlthGGVLKGHKLAVLCLAAA--GNLVFSGSADKNVCVW 399
           777556********************************55552235789*************..***************9 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MLVERNTNNN NSTNKIHRPK FGAFLHSEPS LFHTTNNDDD QGRISSASAA SPRTYFGDSS 60
SSNNASPNYM LSPLNQQTSS PLNKSPWLMP SSEAINLFQY HHSHRHDNNY NDSYFPENGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAACACAAA AGGTGTAACC ATGTTAGTAG AGAGAAACAC CAATAATAAC AATAGCACCA 60
ATAAAATACA TAGACCAAAA TTTGGTGCTT TTCTACACTC CGAACCCTCG TTATTTCACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

mtr:MTR_4g068457

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006874	Arabidopsis thaliana	62.15	6.00e-127	446.00
IUUC-Bol-016061	Brassica oleracea	60.56	1.00e-125	442.00
IUUC-Bra-017040	Brassica rapa	59.22	4.00e-123	434.00
IUUC-Gma-042921	Glycine max	66.67	9.00e-166	575.00
IUUC-Ome-081447	Oryza meridionalis	53.15	2.00e-97	348.00
IUUC-Pop-099212	Populus trichocarpa	62.04	2.00e-158	551.00
IUUC-Ppe-101355	Prunus persica	61.99	8.00e-157	546.00
IUUC-Smo-108849	Selaginella moellendorffii	37.18	2.00e-55	209.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence