iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114287

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G163600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g014300	Sb01g014300.1	Sb01g014300.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-26	92.1	397	444
UBD/Beta-Prp	1.90e-44	152.8	101	379

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sd.tl...........lvsGsdDgtikvWDlrt 32
           gHt++v c+a     +d ++           + sGs Dg++kvW+l++
   Q: 397  GHTGPVKCVAVaadgDDdCYaydadgerrfvVYSGSLDGSVKVWRLSE 444
           8*********999993336667777777887899***********976 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls............................. 82
           ++    +++l tg +++t++vw+ ++   l+ +   ++ v+a+    dg  + tg++D+ ++vw  +                             
   Q: 101  LAA--AGDVLYTGTDSETVRVWRDRR--QLAGFRTGSGLVKAIVVAADG-RIFTGHQDGKVRVWRADgdaagavhrrvgslpplgdllvssvnpss 191
           444..7999*************9999..45799***************9.9*************66666889999********************* PP
   S: 83   .....tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl....... 166
                 +    ++ +h+d v sls+++    l s+s+drt + w ++ + cle     hd++vn+v+  ++g l+ +Gs+D+tv++W+        
   Q: 192  yvrspRRRRAAVWLRHSDAVSSLSLDEAAGLLYSASWDRTFKAWRVSDYRCLE-SVPAHDDAVNTVAAAGFGGLVLTGSADGTVKVWRRevaaaag 286
           **9996666667777**************************************.9999************************************** PP
   S: 167  ....ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq.....tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW..d 250
                +  l r l++g +++v+ ++  ++ + +  gs dg v+ w        + +    l gh + v+++++s  +  +vsgs+Dg++ +W  d
   Q: 287  gdrtTRHVLERVLREGGDGAVTAIAACPEARAVYVGSSDGLVTCWRWGldgggEPRLAGVLAGHGTGVLCLAVS--GRVVVSGSADGTLCVWrrD 379
           **97667777788999***********************************999999*****************..****************442 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGNRKKLVHF LRVDRPAAAA AVSATSSPRS FSSNSSFSDD DGYASSSFQG SASSSPSRSS 60
YSPPKSPWAR LPGLTGAADD DATATGLIAS LVKEDGKVYS LAAAGDVLYT GTDSETVRVW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGCAAGCTC ATGCCTGCCT CCTACGCTCT GCTCTCTTCT CCCTACTCCT CCTCCTCCTC 60
CTCCTCCTCT CCCTTTCGGC GGCTTCCGAT TCCTTCCCGC GCGCGCACGT CGTCGGTCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sbi:SORBI_01g014300

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000826	Aegilops tauschii	62.60	3.00e-29	119.00
IUUC-Hvu-047558	Hordeum vulgare	72.34	2.00e-99	354.00
IUUC-Obr-076438	Oryza brachyantha	71.93	1.00e-85	308.00
IUUC-Ogl-077354	Oryza glaberrima	72.90	5.00e-124	436.00
IUUC-Ogu-078749	Oryza glumaepatula	67.06	9.00e-124	436.00
IUUC-Ome-081447	Oryza meridionalis	72.04	2.00e-120	424.00
IUUC-Oni-082121	Oryza nivara	72.90	5.00e-124	436.00
IUUC-Opu-083562	Oryza punctata	65.64	1.00e-122	432.00
IUUC-Oru-084714	Oryza rufipogon	72.90	5.00e-124	436.00
IUUC-Smo-108849	Selaginella moellendorffii	36.34	3.00e-48	184.00
IUUC-Sit-110073	Setaria italica	78.34	9.00e-158	549.00
IUUC-Tae-124342	Triticum aestivum	66.67	3.00e-130	457.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence