iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111508

Ensembl Protein ID

Solyc03g044830.2.1

UniProt Accession

K4BG96; K4BG96_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc03g044830.2	Solyc03g044830.2.1	Solyc03g044830.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-32	110.6	224	261
UBD/Beta-Prp	5.70e-61	207.0	226	453

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d +++l+   d +ll s+s+D+tikvW+ +++++l 
   Q: 224  HFDAISSLSMsEDqNLLYSASWDKTIKVWRASDFKCLE 261
           778999**998557****************99999986 PP

UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw..dlstgkcvhtlk....ghed 95
           + i+++ +s+d++ll ++s+d+tikvw++++ k+l+s+s he++v++v    dg +  +gs D+t+kvw  +l+ +k+ h ++    ++e 
   Q: 226  DAISSLSMSEDQNLLYSASWDKTIKVWRASDFKCLESISAHEDAVNSVVVGFDG-LVFSGSADGTVKVWrrELQGNKTKHFFSqtllNQEC 315
           67889999*********************************************9.****************9999999998887777999* PP
   S: 96   svlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrtltgghtdsvy 184
            v+sl ++ps+++l  Gs+d  ++ w+  +      +l+gh+++v c+++ +  nl++sGs+D+ + +W+       +l  l+g h ++v+
   Q: 316  AVTSLVVDPSSNFLYCGSSDGFVNFWERAKFLSHGGVLRGHKSAVLCLATAG--NLVFSGSADTNICVWRRegCDHICLSVLKG-HSGPVK 403
           **************************6555555555**************99..***************884445668888898.****** PP
   S: 185  slsfdsng.........kelvsgsldgtvklwdlq..tgecvrtlnghtd 223
           +++++++          + + sgsld++vk+w ++    ++ ++l+++++
   Q: 404  CMAVEEDHgptingdrqFIVYSGSLDKSVKIWRVSpcPPHMQVQLQDQSQ 453
           ***888878888888878899************98776666666666555 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MSMEDQSSVP RRQTFGSMLQ SDPNHDEDEY VNFRTCDQSG LANYDHNHRV SGLSSDYNMM 60
ISPSPSDECY YSLSTTPYVT PSIDLTSSPL SKSPWSSHVE TYLYTGLIGS LVREEGHIYS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCATTATTTT CTTCTCTCAT CATCTCACGA TAATTATTAT TTTCATTTCT CAAAAAGAAG 60
ATAATTACAT GATGAGGAAT TCGAAAACGT ACAACAACAA AATGTCTATG GAGGATCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ome-081447	Oryza meridionalis	52.16	3.00e-100	357.00
IUUC-Stu-112114	Solanum tuberosum	95.22	0.00e+00	885.00
IUUC-Tae-123427	Triticum aestivum	56.52	2.00e-118	418.00
IUUC-Vvi-131677	Vitis vinifera	63.92	5.00e-158	550.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence