iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109458

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377572

Gene Name

SELMODRAFT_85610

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_85610	EFJ32142	EFJ32142

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-38	129.6	50	86
UBD/Beta-Prp	1.20e-78	265.0	3	323

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           H ++v++++f  s +l+vsG+dD +ikvW+++t ++l
   Q: 50   HDGPVRGVHFhrSQPLFVSGGDDYKIKVWNYKTRRCL 86
           99*********544*****************999997 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp 104
           t +++++++++ + f+p +++++++  +g i++wd+++g+l+ ++ +h+++v+ v f+++++++v+g++D+ ikvw+++t+ c+ tl gh d++++++f++
   Q: 3    TKFETKSNRVKGLSFHPRRPWILASLHSGVIQLWDYRMGSLIDRFDEHDGPVRGVHFHRSQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYIRTVQFHQ 103
           67889999********************************************************************************************* PP
   S: 105  sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl...........................ktgkllrtltgg 178
           +  ++vs+s+d+tir+w++++++c++ +l+gh++ v+c+++h +++l+vs+slD+tvr+Wd+                             + + + l+g 
   Q: 104  EYPWIVSASDDQTIRIWNWQSRTCIS-VLTGHNHYVMCASFHVKEDLVVSASLDQTVRVWDIsalrkktvspaedllrltqmnsdlfggGDAVVKYVLEG- 202
           **************************.****************************************999999999977777777765434444444466. PP
   S: 179  htdsvyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgd 277
           h++ v++ sf+++ + +vsg++d++vklw +  ++   v+tl+gh +nv++v f+ +++++vs s+D++iriWd+ ++  ++t+ +++++++  ++ +++ 
   Q: 203  HDRGVNWASFHPSLPLIVSGADDRQVKLWRMNDTKAweVDTLRGHVNNVSCVMFHARQDIIVSNSEDKTIRIWDMSKRSGVHTFRREHDRFWILSG-HPEM 302
           ********************************777668**********************************************************.6666 PP
   S: 278  nvlvlgsedskvniwklkknep 299
           n l++g  ds   ++kl++++p
   Q: 303  NLLAAG-HDSGMIVFKLERERP 323
           655555.689999999988765 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MLTKFETKSN RVKGLSFHPR RPWILASLHS GVIQLWDYRM GSLIDRFDEH DGPVRGVHFH 60
RSQPLFVSGG DDYKIKVWNY KTRRCLFTLL GHLDYIRTVQ FHQEYPWIVS ASDDQTIRIW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGACGA AATTCGAGAC CAAGAGCAAT CGCGTCAAGG GCTTGAGCTT CCATCCCCGG 60
CGGCCATGGA TCTTGGCCAG TCTCCACAGC GGCGTCATCC AGCTATGGGA TTACCGGATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

KEGG

smo:SELMODRAFT_85610

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cre-022969	Chlamydomonas reinhardtii	73.77	0.00e+00	1312.00
IUUC-Cho-024704	Choloepus hoffmanni	70.10	1.00e-132	467.00
IUUC-Cme-027222	Cyanidioschyzon merolae	41.15	1.00e-150	527.00
IUUC-Ome-081993	Oryza meridionalis	78.17	0.00e+00	1262.00
IUUC-Psi-093044	Pelodiscus sinensis	57.26	0.00e+00	941.00
IUUC-Pte-104126	Pyrenophora teres	55.61	0.00e+00	973.00
IUUC-Pyt-104778	Pyrenophora triticirepentis	47.27	0.00e+00	639.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence