iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-018069

Ensembl Protein ID

Bra023041.1-P

UniProt Accession

M4E2P0; M4E2P0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra023041	Bra023041.1	Bra023041.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.00e-08	34.1	105	147

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlp....CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl d+k   ++l+    C+H+fh++C+  w       + + +CP+Cr
   Q: 105  CPICLGDYKG-NHLLRqlpdCKHLFHLKCIDTW------LRLNPTCPVCR 147
           ********66.555555559*************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MNAFQPPPPT PDYNGLLGTD DTGGFRYGIG VSIGVLLLIT TITLASYFCA RKQHSSETDQ 60
DSTHVHHHHH HVIIDVVPGL DEDTIQSYPK ILYSEAKRSS TSSCCPICLG DYKGNHLLRQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACGCCT TCCAACCGCC GCCGCCGACG CCGGATTACA ACGGCCTGCT CGGTACTGAC 60
GATACAGGAG GATTCAGATA CGGGATTGGA GTCTCCATCG GAGTGCTTCT CCTCATCACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006033	Arabidopsis lyrata	85.00	7.00e-63	232.00
IUUC-Ath-007108	Arabidopsis thaliana	85.56	3.00e-64	237.00
IUUC-Bdi-014078	Brachypodium distachyon	57.29	4.00e-21	94.00
IUUC-Bol-016119	Brassica oleracea	95.43	2.00e-74	271.00
IUUC-Lpe-051365	Leersia perrieri	53.54	5.00e-19	87.00
IUUC-Mtr-058770	Medicago truncatula	71.74	5.00e-29	119.00
IUUC-Mac-064629	Musa acuminata	53.61	3.00e-24	103.00
IUUC-Obr-076328	Oryza brachyantha	55.07	2.00e-18	85.50
IUUC-Ogl-077901	Oryza glaberrima	52.43	1.00e-17	82.40
IUUC-Ogu-078319	Oryza glumaepatula	52.43	1.00e-17	82.40
IUUC-Oin-079366	Oryza indica	53.40	4.00e-18	84.00
IUUC-Ome-081462	Oryza meridionalis	52.94	1.00e-17	82.80
IUUC-Oni-082925	Oryza nivara	52.43	1.00e-17	82.40
IUUC-Opu-083306	Oryza punctata	54.55	9.00e-18	82.80
IUUC-Oru-085270	Oryza rufipogon	50.49	1.00e-18	85.90
IUUC-Osa-085759	Oryza sativa	50.49	1.00e-18	85.90
IUUC-Pop-099253	Populus trichocarpa	63.49	2.00e-31	127.00
IUUC-Ppe-101919	Prunus persica	62.20	2.00e-30	124.00
IUUC-Sit-110656	Setaria italica	57.45	2.00e-22	98.20
IUUC-Stu-112816	Solanum tuberosum	59.66	8.00e-38	149.00
IUUC-Sbi-114665	Sorghum bicolor	44.22	6.00e-23	99.80
IUUC-Tae-124786	Triticum aestivum	59.57	2.00e-22	98.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence