iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113815

Ensembl Protein ID

Sb01g005110.1

UniProt Accession

C5WX63; C5WX63_SORBI

Genbank Protein ID

EER90734.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G056100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g005110	Sb01g005110.1	Sb01g005110.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	6.30e-16	59.1	100	181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt..lt.....elkn.sevalkYeDedGDlvtlksDedldkavsllaskksllrlliqk 83
            vkvs++g+++++++dl+ +g++++L++a+ t   +     + ++  ++a+ YeD+dGDl+ l +D+++++++       s+++l+i+ 
   Q: 100  YVKVSMDGAPYLRKVDLRTYGGYRELRDALDTlfGCfsssaAADGgCQFAIAYEDKDGDLM-LAGDVPWEMFIC------SCKKLRIMR 181
           69******************************863366777888889**************.************......9*****995 PP

Organism

Sorghum bicolor

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MEMIDAELRL GPPGSNSDVV VTVVQPTRTP ASAAAKRRPE SSVVKSEASG TDDHDDAAPA 60
SKVQVVGWPP VRAYRKNAFH AAAEARRATK GGEQQGSGLY VKVSMDGAPY LRKVDLRTYG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGACGACGA GCAGTGCAAG CCAAGCATTC TTCTCACGCT AGCTGTTCTC TCTGCTTCTT 60
TGCCATCATC TCTCTCGGCG AGTTCGTCGT CGATCGGTGT TGCATATCCA CACCACCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sbi:SORBI_01g005110

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000756	Aegilops tauschii	64.43	5.00e-56	209.00
IUUC-Bgr-012051	Blumeria graminis	25.76	6.10e+00	25.80
IUUC-Hvu-047277	Hordeum vulgare	60.82	4.00e-51	192.00
IUUC-Ncr-068819	Neurospora crassa	34.92	3.50e-01	30.00
IUUC-Ogl-077293	Oryza glaberrima	60.29	2.00e-47	180.00
IUUC-Ogu-078598	Oryza glumaepatula	66.91	4.00e-45	173.00
IUUC-Oin-079636	Oryza indica	64.74	2.00e-49	187.00
IUUC-Ome-081889	Oryza meridionalis	57.64	6.00e-44	169.00
IUUC-Oni-082111	Oryza nivara	64.74	2.00e-49	187.00
IUUC-Oru-084753	Oryza rufipogon	66.67	4.00e-43	166.00
IUUC-Osa-085700	Oryza sativa	64.74	3.00e-49	187.00
IUUC-Tae-122736	Triticum aestivum	63.02	2.00e-56	210.00
IUUC-Tur-126832	Triticum urartu	65.28	2.00e-51	193.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence