iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110915

Ensembl Protein ID

Solyc12g094690.1.1

UniProt Accession

K4DH41; K4DH41_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc12g094690.1	Solyc12g094690.1.1	Solyc12g094690.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.30e-08	34.7	100	142

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f   d+ +vlp CgH fh  C+  w         + +CP Cr
   Q: 100  CAICLMEFviGDEIRVLPqCGHGFHVGCIDTW------LGSHSSCPSCR 142
           ********99666*******************......99********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MSNSGSINSP ASLSPPENQP LEINIVDSDF VVILAALLCG LICVIGLVAV ARCAWIRRIT 60
GGNSDDSPFP PANKGLKKKV LKSLPKFSYT PEQSVQFSEC AICLMEFVIG DEIRVLPQCG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTAACT CCGGCAGCAT AAACTCGCCG GCTTCACTAT CACCGCCGGA GAATCAGCCG 60
TTAGAAATCA ACATCGTCGA TTCCGACTTC GTTGTTATCT TAGCTGCTCT TCTCTGCGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sly:101248283

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000545	Aegilops tauschii	52.81	2.00e-20	90.90
IUUC-Atr-002926	Amborella trichopoda	48.37	6.00e-25	105.00
IUUC-Hvu-047055	Hordeum vulgare	51.20	4.00e-29	119.00
IUUC-Oin-079945	Oryza indica	52.05	5.00e-33	132.00
IUUC-Ome-081259	Oryza meridionalis	42.75	8.00e-23	99.00
IUUC-Opu-083570	Oryza punctata	45.45	5.00e-24	103.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence