iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007227

UUCD1 version

UUC-ArT-00659

Ensembl Protein ID

AT1G21651.1

UniProt Accession

Q8VZ06; Q8VZ06_ARATH

Genbank Protein ID

AAL38845.1; AAM20152.1; AEE30135.1; BAF01579.1

Protein Name

Putative SecA-type chloroplast protein transport factor; Putative SecA-type chloroplast transport factor protein; Putative uncharacterized protein At1g21655; Zinc ion binding protein

Genbank Nucleotide ID

AY065404; AY096502; CP002684; AK229742

Gene Name

At1g21650; At1g21651; At1g21655

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G21651	AT1G21651.1	AT1G21651.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-19	68.5	522	558
E3 activity/RING/RING	1.00e-05	26.8	6	50

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+dsvt+la  + ++l s+s+D ti +W+l+++  ++
   Q: 522  GHQDSVTGLAV-GgGFLFSSSYDRTILIWSLKDFSHVH 558
           8*********9.449****************9987665 PP

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++Cl+++   ++ p+vl CgH+ +++Cl ++   +++   ++rCP C
   Q: 6    CPVCLQSYdgeSTVPRVLACGHTACEECLTNL---PKKFPDTIRCPAC 50
           ********555445***************888...66689999***** PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MEEPECPVCL QSYDGESTVP RVLACGHTAC EECLTNLPKK FPDTIRCPAC TVLVKFPPQG 60
PSALPKNIDL LRLFPSISKL KLEPGRNFEK VVEFVTRSWS DDFYATWKDR ILVHDAVSVE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTTAAAGTC TAAAACGTCG TCGGATTAAC TCAGTTGTTC GTCGCATCGA ATCATCGGAG 60
GTGATGGAGG AACCGGAGTG TCCGGTGTGT CTACAGTCTT ACGACGGCGA GTCTACTGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011009--Kinase-like_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50089--ZF_RING_2

Pfam

PF00400--WD40
PF13445--zf-RING_UBOX

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

ath:AT1G21651

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000569	Aegilops tauschii	30.53	4.00e-74	271.00
IUUC-Bdi-015002	Brachypodium distachyon	36.68	6.00e-106	377.00
IUUC-Hvu-047671	Hordeum vulgare	36.64	2.00e-111	395.00
IUUC-Mtr-058342	Medicago truncatula	60.00	2.00e-101	361.00
IUUC-Mac-065113	Musa acuminata	38.05	3.00e-144	505.00
IUUC-Oba-075807	Oryza barthii	36.07	1.00e-104	374.00
IUUC-Obr-076101	Oryza brachyantha	36.01	1.00e-104	373.00
IUUC-Ogl-077321	Oryza glaberrima	35.26	5.00e-102	364.00
IUUC-Ogu-078456	Oryza glumaepatula	36.77	3.00e-101	362.00
IUUC-Ome-081976	Oryza meridionalis	34.98	4.00e-114	405.00
IUUC-Oni-082359	Oryza nivara	35.89	1.00e-103	370.00
IUUC-Opu-083757	Oryza punctata	35.13	6.00e-100	358.00
IUUC-Oru-085207	Oryza rufipogon	35.99	7.00e-104	370.00
IUUC-Osa-085546	Oryza sativa	31.02	2.00e-52	199.00
IUUC-Pop-098862	Populus trichocarpa	46.79	0.00e+00	716.00
IUUC-Ppe-101295	Prunus persica	44.94	0.00e+00	677.00
IUUC-Sit-110599	Setaria italica	35.60	5.00e-101	361.00
IUUC-Sly-111867	Solanum lycopersicum	52.42	6.00e-105	373.00
IUUC-Sbi-114828	Sorghum bicolor	35.41	1.00e-109	389.00
IUUC-Tca-121601	Theobroma cacao	47.71	0.00e+00	744.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence