iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-111967

Ensembl Protein ID

PGSC0003DMT400070587

UniProt Accession

M1CME1; M1CME1_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400027436	PGSC0003DMT400070587	PGSC0003DMT400070587

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.70e-07	31.8	102	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlp....CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ f+d   +l+    C+H+fh +C+ +w        k+ +CPlCr
   Q: 102  CCVCLSKFED-IEILRlipmCKHAFHINCIDQW------LEKHSTCPLCR 144
           ********88.66666666**************......**********8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MLLLLSLNVK AEDLPTSSSQ DVVSSFQPSL AVVIGVLFIM FSLTFFLLLY AKFCHTASSH 60
IQNDGGLVRS VSRSSGIDKT VVESLPFFRF SLLRGSKQGL ECCVCLSKFE DIEILRLIPM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTACTAC TTCTTTCATT GAATGTAAAA GCTGAAGATT TGCCAACTTC TTCTTCACAA 60
GATGTTGTTA GCAGTTTTCA ACCAAGCCTT GCTGTTGTTA TTGGTGTCCT CTTTATCATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006498	Arabidopsis lyrata	50.32	5.00e-75	273.00
IUUC-Ath-006742	Arabidopsis thaliana	44.10	2.00e-69	254.00
IUUC-Bol-015814	Brassica oleracea	45.71	4.00e-83	300.00
IUUC-Bra-017519	Brassica rapa	44.95	7.00e-77	280.00
IUUC-Gma-042792	Glycine max	50.25	7.00e-102	362.00
IUUC-Hvu-047489	Hordeum vulgare	37.13	2.00e-52	198.00
IUUC-Lpe-051018	Leersia perrieri	35.01	2.00e-49	188.00
IUUC-Mtr-057998	Medicago truncatula	45.88	2.00e-86	311.00
IUUC-Mac-064701	Musa acuminata	44.02	6.00e-74	269.00
IUUC-Oba-075667	Oryza barthii	39.45	2.00e-52	198.00
IUUC-Obr-076167	Oryza brachyantha	37.02	7.00e-37	146.00
IUUC-Ogl-077500	Oryza glaberrima	39.45	2.00e-52	198.00
IUUC-Ogu-078252	Oryza glumaepatula	38.91	6.00e-52	196.00
IUUC-Ome-081414	Oryza meridionalis	39.45	3.00e-51	194.00
IUUC-Oni-082687	Oryza nivara	39.45	2.00e-52	198.00
IUUC-Opu-084088	Oryza punctata	41.87	1.00e-64	239.00
IUUC-Oru-084787	Oryza rufipogon	39.69	1.00e-53	202.00
IUUC-Osa-085704	Oryza sativa	39.45	2.00e-52	198.00
IUUC-Pop-099837	Populus trichocarpa	48.82	2.00e-92	331.00
IUUC-Ppe-101585	Prunus persica	49.52	4.00e-93	333.00
IUUC-Sit-110634	Setaria italica	37.37	3.00e-62	231.00
IUUC-Sly-111674	Solanum lycopersicum	81.66	7.00e-153	531.00
IUUC-Sbi-114371	Sorghum bicolor	35.44	6.00e-47	180.00
IUUC-Tca-121197	Theobroma cacao	51.90	2.00e-105	375.00
IUUC-Tae-125327	Triticum aestivum	35.55	3.00e-52	197.00
IUUC-Vvi-131412	Vitis vinifera	51.68	4.00e-102	363.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence