iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044019

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000848

Gene Name

LOC100777151; GLYMA_15G122400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA15G12890	GLYMA15G12890.1	GLYMA15G12890.1
GLYMA15G12890	GLYMA15G12890.3	GLYMA15G12890.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-11	45.0	292	330

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt +vt++af   d +ll+s+s Dg i +W +++g+++
   Q: 292  GHTQRVTDMAFfaEDlHLLASASTDGRIFIWKIKEGPDE 330
           8*********9998899***************9998875 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MASSGNPNPQ LQQPQQQQNF DFNKLFKAPT TSSPSTSTSP SIPNPSNLNS SPSFPAPSPS 60
TPPPSSYPTP SSSYPPPTGT YPYHHPHFLP YPALHHHQQQ HQEHPLILHH LPQMHAPQRP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCTATCATC ACCATTTTGT ACCATCTTTG TAGTGCTATG ATGGTTGCCA TTGCCATTGT 60
TCCAAAATCC CCATCCTTTG GTCGTTGCAG CTATTTTTTA AATTGGATGA TGCAAAAACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032401--EDC4_WD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16529--Ge1_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000932--C:P-body
GO:0031087--P:deadenylation-independent decapping of nuclear-transcribed mRNA

KEGG

gmx:100777151

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000781	Aegilops tauschii	50.89	0.00e+00	1139.00
IUUC-Atr-002815	Amborella trichopoda	51.73	0.00e+00	1224.00
IUUC-Hvu-047656	Hordeum vulgare	49.58	0.00e+00	1137.00
IUUC-Lpe-051603	Leersia perrieri	50.87	0.00e+00	1073.00
IUUC-Mtr-057889	Medicago truncatula	73.91	0.00e+00	1783.00
IUUC-Oan-072701	Ornithorhynchus anatinus	25.95	3.00e-06	47.00
IUUC-Ome-081610	Oryza meridionalis	51.38	0.00e+00	1107.00
IUUC-Opu-084175	Oryza punctata	50.85	0.00e+00	1077.00
IUUC-Ppa-095912	Physcomitrella patens	53.08	7.00e-136	479.00
IUUC-Pop-100004	Populus trichocarpa	63.92	0.00e+00	1404.00
IUUC-Tca-121627	Theobroma cacao	64.92	0.00e+00	1492.00
IUUC-Tae-125553	Triticum aestivum	50.00	0.00e+00	1147.00
IUUC-Tur-126244	Triticum urartu	46.92	0.00e+00	1038.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence