iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114245

UUCD1 version

UUC-SoB-01411

Ensembl Protein ID

Sb10g015690.1

UniProt Accession

A0A194YJ63; A0A194YJ63_SORBI

Genbank Protein ID

KXG19988.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G140500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g015690	Sb10g015690.1	Sb10g015690.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.50e-28	99.4	212	283

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p ef+Cp+sl+lM+dPv++ sG+ty+r++Ie+w+++g  tcP t+++l++ +++Pn+ ++++i++wc++++
   Q: 212  PPLEFCCPLSLKLMQDPVIITSGQTYERENIERWFSEGYDTCPRTHTKLKNCTVTPNTCMKAVIHNWCKDHE 283
           6889*****************************************************************997 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MCNELTLMLD KVSSILPSIE AAQPGCKAGV EELCNLYNIV GKGKLIIQNC IECSSLYLVA 60
DVHNELRDLK FIVDPAEEDA GKVILEMLRH SDVTQELELQ TFLLAASKLN ITSPKAVLIE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGCAATG AGTTGACTTT GATGCTGGAT AAGGTTTCCT CTATTCTTCC ATCAATAGAA 60
GCTGCTCAAC CAGGATGCAA AGCAGGTGTA GAGGAACTAT GCAACCTATA CAACATAGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000477	Aegilops tauschii	65.12	0.00e+00	791.00
IUUC-Hvu-047724	Hordeum vulgare	59.97	0.00e+00	813.00
IUUC-Lpe-051243	Leersia perrieri	63.93	0.00e+00	870.00
IUUC-Oba-075453	Oryza barthii	64.55	0.00e+00	903.00
IUUC-Obr-076389	Oryza brachyantha	64.68	0.00e+00	934.00
IUUC-Ogl-077070	Oryza glaberrima	64.41	0.00e+00	902.00
IUUC-Ogu-078782	Oryza glumaepatula	64.41	0.00e+00	901.00
IUUC-Oin-079266	Oryza indica	64.14	0.00e+00	899.00
IUUC-Olo-080310	Oryza longistaminata	64.55	0.00e+00	906.00
IUUC-Ome-081198	Oryza meridionalis	64.41	0.00e+00	903.00
IUUC-Oni-082841	Oryza nivara	64.28	0.00e+00	904.00
IUUC-Opu-083317	Oryza punctata	63.87	0.00e+00	896.00
IUUC-Oru-084987	Oryza rufipogon	64.55	0.00e+00	903.00
IUUC-Osa-085993	Oryza sativa	64.41	0.00e+00	903.00
IUUC-Sit-109692	Setaria italica	80.54	0.00e+00	1139.00
IUUC-Tae-125624	Triticum aestivum	58.59	0.00e+00	787.00
IUUC-Tur-126081	Triticum urartu	62.34	0.00e+00	805.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence