iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-003161

Ensembl Protein ID

ERN13976

UniProt Accession

W1Q0L3; W1Q0L3_AMBTC

Genbank Protein ID

ERN13976.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392560

Gene Name

AMTR_s00021p00161170

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00021p00161170	ERN13976	ERN13976

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-07	32.0	113	155

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl+ +++g   ++lp C+Hvfh +C+ +w       + +++CP+Cr
   Q: 113  CTVCLSALEEGetGRLLPnCQHVFHVECIDMW------LQSHDTCPICR 155
           99**999966555677778*************......**********8 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MSSDDDDKGG SKQPKMDSKF MLAAVVSLFV VVIFVLLLNI YVRCFMKRPS SRSRQRPAHG 60
HRASVNIVIE RLSSPTNQAT NGTATTNKPV GLDAAVMGKL PIFKTGPQGG GECTVCLSAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCAG ACGACGATGA TAAAGGAGGT TCTAAGCAAC CCAAAATGGA CAGCAAGTTC 60
ATGCTCGCAG CTGTGGTCTC TCTCTTTGTG GTGGTGATCT TCGTGCTCCT CCTCAACATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

atr:18442224

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005545	Arabidopsis lyrata	40.30	1.00e-22	98.20
IUUC-Ath-007263	Arabidopsis thaliana	40.71	5.00e-24	102.00
IUUC-Bdi-014715	Brachypodium distachyon	53.25	4.00e-20	89.70
IUUC-Bol-015414	Brassica oleracea	41.33	8.00e-25	105.00
IUUC-Bra-017497	Brassica rapa	33.66	6.00e-25	105.00
IUUC-Gma-042714	Glycine max	53.66	3.00e-20	90.50
IUUC-Mtr-058446	Medicago truncatula	55.91	2.00e-25	108.00
IUUC-Mac-065470	Musa acuminata	45.83	2.00e-26	111.00
IUUC-Obr-076025	Oryza brachyantha	50.67	1.00e-14	71.20
IUUC-Ogu-078013	Oryza glumaepatula	56.52	4.00e-18	82.80
IUUC-Olo-080853	Oryza longistaminata	47.78	5.00e-13	66.60
IUUC-Ome-081346	Oryza meridionalis	54.67	2.00e-18	86.30
IUUC-Pop-099366	Populus trichocarpa	45.53	2.00e-22	97.80
IUUC-Sly-111845	Solanum lycopersicum	35.89	3.00e-29	120.00
IUUC-Stu-112253	Solanum tuberosum	36.97	4.00e-35	140.00
IUUC-Tur-126476	Triticum urartu	31.93	6.00e-18	82.80
IUUC-Vvi-130902	Vitis vinifera	56.25	9.00e-23	99.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence