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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105205
UUCD1 version UUC-RaN-00536
Ensembl Protein ID ENSRNOP00000035675.4
UniProt Accession F1LRQ6; F1LRQ6_RAT
Genbank Protein ID EDL76237.1
Protein Name CDC23 (Cell division cycle 23, yeast, homolog), isoform CRA_b; Cell division cycle 23
Genbank Nucleotide ID AABR07031695
Gene Name Cdc23; rCG_49568
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000024241.4 ENSRNOT00000037888.4 ENSRNOP00000035675.4
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
CPLMdbPAFPhosphositePlus
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 adaptor/Cullin RING/APC_C/APC_C 97.98 0.00e+00 1080.00 IUUC-Hsa-045713
E3 adaptor/Cullin RING/APC_C/APC_C 32.64 2.00e-65 244.00 IUUC-Sce-106199
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MAANSSVVSV AAAATTVPGV STVADFSDLR EIKKQLLLIA GLTRERGLLH SSKWSAELAF 60
SLPALPLSEL QPPPPLTEED AQDVDAYTLA KAYFDVKEYD RAAHFLHGCN SKKAYFLYMY 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105205|E3,APC_C|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TTGTGATTGG TTGTTCCGAG CAAGGCTAGA CCAATAAGAG GCAGAAGTTT TCGCTTCCGC 60
GGAGCAAGTA TTGTTGCCGC TGATTGGCTG GAGCGGCCGA GGGAGGAAAA TGGCTGCGAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105205|E3,APC_C|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0131--Cell cycle
KW-0132--Cell division
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0802--TPR repeat
Interpro

IPR007192--APC8
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
PROSITE

PS50005--TPR
PS50293--TPR_REGION
Pfam

PF04049--ANAPC8
PF13414--TPR_11
PF13181--TPR_8
SMART

SM00028--TPR
Gene Ontology

GO:0005680--C:anaphase-promoting complex
GO:0051301--P:cell division
GO:0007080--P:mitotic metaphase plate congression
GO:0070979--P:protein K11-linked ubiquitination
GO:0030071--P:regulation of mitotic metaphase/anaphase transition
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000540 Aegilops tauschii 48.76 2.00e-103 370.00
IUUC-Aml-002139 Ailuropoda melanoleuca 97.61 0.00e+00 1075.00
IUUC-Atr-002658 Amborella trichopoda 47.46 2.00e-122 432.00
IUUC-Apl-004020 Anas platyrhynchos 94.49 0.00e+00 965.00
IUUC-Aca-005101 Anolis carolinensis 91.26 0.00e+00 1004.00
IUUC-Aly-006437 Arabidopsis lyrata 46.53 3.00e-117 415.00
IUUC-Ath-006712 Arabidopsis thaliana 46.53 1.00e-115 410.00
IUUC-Ago-007953 Ashbya gossypii 34.80 9.00e-70 258.00
IUUC-Acl-008166 Aspergillus clavatus 36.88 4.00e-90 325.00
IUUC-Afl-008420 Aspergillus flavus 37.11 6.00e-91 328.00
IUUC-Afu-009028 Aspergillus fumigatus 37.00 2.00e-89 323.00
IUUC-Ani-009390 Aspergillus nidulans 36.40 1.00e-91 330.00
IUUC-Ang-009704 Aspergillus niger 37.74 4.00e-90 325.00
IUUC-Aor-009990 Aspergillus oryzae 37.29 4.00e-91 328.00
IUUC-Ate-010510 Aspergillus terreus 36.28 5.00e-89 322.00
IUUC-Ame-011724 Astyanax mexicanus 68.36 0.00e+00 748.00
IUUC-Bgr-012007 Blumeria graminis 35.45 6.00e-80 291.00
IUUC-Bta-013310 Bos taurus 97.61 0.00e+00 1109.00
IUUC-Bci-013833 Botrytis cinerea 37.47 2.00e-84 306.00
IUUC-Bdi-014957 Brachypodium distachyon 46.31 6.00e-117 414.00
IUUC-Bol-016105 Brassica oleracea 47.23 1.00e-120 426.00
IUUC-Bra-017168 Brassica rapa 46.41 2.00e-110 393.00
IUUC-Cel-018142 Caenorhabditis elegans 36.27 1.00e-80 294.00
IUUC-Cja-019339 Callithrix jacchus 96.91 0.00e+00 1077.00
IUUC-Cfa-020690 Canis familiaris 97.61 0.00e+00 1075.00
IUUC-Cpo-021859 Cavia porcellus 96.42 0.00e+00 1082.00
IUUC-Cre-022698 Chlamydomonas reinhardtii 40.80 3.00e-76 279.00
IUUC-Csa-024176 Chlorocebus sabaeus 97.09 0.00e+00 1115.00
IUUC-Cho-024903 Choloepus hoffmanni 96.09 0.00e+00 967.00
IUUC-Cin-025468 Ciona intestinalis 45.28 8.00e-128 450.00
IUUC-Csv-026223 Ciona savignyi 46.69 1.00e-136 480.00
IUUC-Cgl-026453 Colletotrichum gloeosporioides 36.69 1.00e-81 297.00
IUUC-Cne-027038 Cryptococcus neoformans 35.49 9.00e-82 297.00
IUUC-Cme-027161 Cyanidioschyzon merolae 37.27 1.00e-72 267.00
IUUC-Dre-027972 Danio rerio 80.47 0.00e+00 899.00
IUUC-Dno-029164 Dasypus novemcinctus 97.44 0.00e+00 1075.00
IUUC-Dor-030344 Dipodomys ordii 86.91 0.00e+00 934.00
IUUC-Dse-031277 Dothistroma septosporum 43.83 1.00e-53 203.00
IUUC-Dme-031895 Drosophila melanogaster 48.98 6.00e-144 504.00
IUUC-Ete-032942 Echinops telfairi 93.50 0.00e+00 949.00
IUUC-Eca-034355 Equus caballus 97.25 0.00e+00 1075.00
IUUC-Eeu-035313 Erinaceus europaeus 96.26 2.00e-174 605.00
IUUC-Fca-035799 Felis catus 97.44 0.00e+00 1071.00
IUUC-Fal-037373 Ficedula albicollis 92.29 0.00e+00 1004.00
IUUC-Fox-037722 Fusarium oxysporum 34.65 2.00e-78 286.00
IUUC-Fso-038295 Fusarium solani 34.48 4.00e-72 266.00
IUUC-Gmo-039241 Gadus morhua 79.82 0.00e+00 894.00
IUUC-Ggr-039994 Gaeumannomyces graminis 41.60 1.00e-74 274.00
IUUC-Gga-040280 Gallus gallus 91.64 0.00e+00 998.00
IUUC-Gac-042265 Gasterosteus aculeatus 81.14 0.00e+00 911.00
IUUC-Gma-043161 Glycine max 45.67 3.00e-116 412.00
IUUC-Ggo-044898 Gorilla gorilla 89.49 0.00e+00 974.00
IUUC-Hsa-045713 Homo sapiens 97.27 0.00e+00 1080.00
IUUC-Hvu-047296 Hordeum vulgare 51.40 9.00e-104 370.00
IUUC-Itr-048205 Ictidomys tridecemlineatus 97.64 0.00e+00 1084.00
IUUC-Kpa-049344 Komagataella pastoris 37.84 1.00e-72 267.00
IUUC-Lch-049878 Latimeria chalumnae 86.62 0.00e+00 949.00
IUUC-Lpe-050917 Leersia perrieri 52.13 2.00e-118 419.00
IUUC-Loc-052893 Lepisosteus oculatus 59.93 9.00e-175 606.00
IUUC-Lma-053031 Leptosphaeria maculans 33.33 1.00e-87 317.00
IUUC-Laf-053888 Loxodonta africana 97.25 0.00e+00 1075.00
IUUC-Mcc-055617 Macaca mulatta 92.34 0.00e+00 1006.00
IUUC-Meu-056377 Macropus eugenii 90.62 0.00e+00 980.00
IUUC-Mor-057030 Magnaporthe oryzae 36.25 2.00e-79 290.00
IUUC-Mpo-057558 Magnaporthe poae 41.16 6.00e-75 275.00
IUUC-Mtr-058778 Medicago truncatula 45.76 8.00e-117 414.00
IUUC-Mla-058861 Melampsora laricipopulina 36.81 1.00e-72 267.00
IUUC-Mga-059809 Meleagris gallopavo 89.69 0.00e+00 972.00
IUUC-Mvi-060381 Microbotryum violaceum 36.40 4.00e-79 289.00
IUUC-Mmr-060669 Microcebus murinus 92.36 0.00e+00 1007.00
IUUC-Mdo-062293 Monodelphis domestica 94.14 0.00e+00 1033.00
IUUC-Mmu-064261 Mus musculus 99.82 0.00e+00 1090.00
IUUC-Mac-065082 Musa acuminata 51.06 4.00e-119 421.00
IUUC-Mpu-066465 Mustela putorius furo 83.57 0.00e+00 900.00
IUUC-Mlu-067770 Myotis lucifugus 96.73 0.00e+00 1111.00
IUUC-Nfi-068311 Neosartorya fischeri 41.12 3.00e-87 316.00
IUUC-Ncr-068653 Neurospora crassa 37.38 2.00e-80 293.00
IUUC-Nle-069036 Nomascus leucogenys 97.09 0.00e+00 1080.00
IUUC-Opr-070229 Ochotona princeps 97.80 0.00e+00 799.00
IUUC-Ont-072218 Oreochromis niloticus 81.58 0.00e+00 932.00
IUUC-Oan-073467 Ornithorhynchus anatinus 88.89 4.00e-29 120.00
IUUC-Ocu-073869 Oryctolagus cuniculus 97.64 0.00e+00 1083.00
IUUC-Oba-075863 Oryza barthii 50.71 2.00e-115 409.00
IUUC-Obr-076071 Oryza brachyantha 51.18 4.00e-116 411.00
IUUC-Ogl-077026 Oryza glaberrima 50.90 2.00e-108 385.00
IUUC-Ogu-078601 Oryza glumaepatula 50.71 1.00e-115 410.00
IUUC-Oin-079443 Oryza indica 50.71 2.00e-115 409.00
IUUC-Olo-080836 Oryza longistaminata 51.23 7.00e-113 400.00
IUUC-Ome-081640 Oryza meridionalis 46.38 3.00e-113 402.00
IUUC-Oni-083014 Oryza nivara 50.71 2.00e-115 409.00
IUUC-Opu-083788 Oryza punctata 50.95 1.00e-115 410.00
IUUC-Oru-085205 Oryza rufipogon 50.35 3.00e-115 409.00
IUUC-Osa-085809 Oryza sativa 50.71 3.00e-115 409.00
IUUC-Ola-087272 Oryzias latipes 80.04 0.00e+00 890.00
IUUC-Olu-087775 Ostreococcus lucimarinus 42.66 3.00e-102 365.00
IUUC-Oga-088234 Otolemur garnettii 97.62 0.00e+00 1077.00
IUUC-Oar-089533 Ovis aries 97.61 0.00e+00 1109.00
IUUC-Ptr-090956 Pan troglodytes 97.27 0.00e+00 1080.00
IUUC-Pan-091781 Papio anubis 97.27 0.00e+00 1080.00
IUUC-Psi-093533 Pelodiscus sinensis 92.07 0.00e+00 1034.00
IUUC-Pma-094153 Petromyzon marinus 72.94 0.00e+00 818.00
IUUC-Pno-095099 Phaeosphaeria nodorum 35.87 1.00e-76 280.00
IUUC-Ppa-095917 Physcomitrella patens 49.36 3.00e-123 435.00
IUUC-Pfo-096378 Poecilia formosa 80.84 0.00e+00 928.00
IUUC-Pab-098457 Pongo abelii 97.09 0.00e+00 1116.00
IUUC-Pop-099359 Populus trichocarpa 46.08 5.00e-115 408.00
IUUC-Pca-100406 Procavia capensis 97.40 2.00e-136 479.00
IUUC-Ppe-101636 Prunus persica 46.08 8.00e-117 414.00
IUUC-Pva-103102 Pteropus vampyrus 96.56 0.00e+00 1080.00
IUUC-Pgr-103324 Puccinia graminis 36.59 3.00e-83 302.00
IUUC-Ptt-103755 Puccinia triticina 37.45 3.00e-79 289.00
IUUC-Pte-104290 Pyrenophora teres 37.97 3.00e-89 322.00
IUUC-Pyt-104739 Pyrenophora triticirepentis 37.65 4.00e-89 322.00
IUUC-Sce-106199 Saccharomyces cerevisiae 35.09 3.00e-59 223.00
IUUC-Sha-107218 Sarcophilus harrisii 94.51 0.00e+00 1031.00
IUUC-Sja-107667 Schizosaccharomyces japonicus 39.41 5.00e-99 355.00
IUUC-Spo-108380 Schizosaccharomyces pombe 41.85 4.00e-100 358.00
IUUC-Smo-109350 Selaginella moellendorffii 47.82 3.00e-118 419.00
IUUC-Sit-110418 Setaria italica 45.14 8.00e-119 421.00
IUUC-Sly-111724 Solanum lycopersicum 46.87 2.00e-115 409.00
IUUC-Stu-112247 Solanum tuberosum 49.50 2.00e-105 376.00
IUUC-Sar-113502 Sorex araneus 83.82 0.00e+00 906.00
IUUC-Sbi-113784 Sorghum bicolor 45.98 8.00e-120 424.00
IUUC-Sre-115116 Sporisorium reilianum 33.41 3.00e-57 216.00
IUUC-Ssc-115914 Sus scrofa 97.26 0.00e+00 1112.00
IUUC-Tgu-117390 Taeniopygia guttata 92.82 0.00e+00 1002.00
IUUC-Tru-118703 Takifugu rubripes 80.85 0.00e+00 909.00
IUUC-Tsy-118972 Tarsius syrichta 94.62 0.00e+00 758.00
IUUC-Tni-119710 Tetraodon nigroviridis 80.29 0.00e+00 898.00
IUUC-Tca-121327 Theobroma cacao 47.00 5.00e-115 408.00
IUUC-Tre-121974 Trichoderma reesei 37.10 2.00e-72 266.00
IUUC-Tvi-122260 Trichoderma virens 36.86 9.00e-72 264.00
IUUC-Tae-124866 Triticum aestivum 47.74 1.00e-68 253.00
IUUC-Tme-127161 Tuber melanosporum 37.41 5.00e-100 358.00
IUUC-Tbe-127932 Tupaia belangeri 97.14 0.00e+00 878.00
IUUC-Ttr-129091 Tursiops truncatus 97.44 0.00e+00 1110.00
IUUC-Uma-129376 Ustilago maydis 34.46 3.00e-58 219.00
IUUC-Vda-129821 Verticillium dahliae 33.28 4.00e-78 285.00
IUUC-Vpa-130644 Vicugna pacos 97.80 0.00e+00 1112.00
IUUC-Vvi-130971 Vitis vinifera 46.98 2.00e-116 412.00
IUUC-Xtr-132050 Xenopus tropicalis 89.09 0.00e+00 999.00
IUUC-Xma-133078 Xiphophorus maculatus 80.84 0.00e+00 909.00
IUUC-Yli-134413 Yarrowia lipolytica 38.84 3.00e-84 305.00
IUUC-Zma-135224 Zea mays 45.67 8.00e-119 421.00
Created Date 25-Jun-2017

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