iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095281

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545074

Gene Name

PHYPADRAFT_89650

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S185_139V6	PP1S185_139V6.1	PP1S185_139V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-07	33.1	183	225

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f+d   +++lp C+H+fh+dC+  w         + +CPlCr
   Q: 183  CAVCLSRFEDAdiLRLLPkCKHAFHLDCVDTW------LVSHSTCPLCR 225
           ********77656888889*************......**********8 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGNSQSDFMV RRKWCPHSFK LRASGRWHCQ WALRAGGEAY ILQCQSSCEC FRLLPSMSLT 60
YGDFGGPSPA PLPYYQPPSN GSRPFPNSPE PRGSPGATPF RPSIAVIIGV LTTMFSLTFL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAAATT CTCAAAGTGA TTTTATGGTT CGAAGAAAAT GGTGTCCTCA TTCCTTCAAG 60
CTGCGCCAAT ACGCCGTTGT TATTTGCTGA AGAATGTGCA GATGTGATAA CATGGAACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_89650

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002959	Amborella trichopoda	51.50	2.00e-43	169.00
IUUC-Aly-006151	Arabidopsis lyrata	33.53	8.00e-42	163.00
IUUC-Ath-007131	Arabidopsis thaliana	33.43	1.00e-32	133.00
IUUC-Bdi-014982	Brachypodium distachyon	57.36	5.00e-39	154.00
IUUC-Bol-015760	Brassica oleracea	51.02	2.00e-40	159.00
IUUC-Bra-017357	Brassica rapa	50.34	8.00e-39	153.00
IUUC-Gma-042757	Glycine max	37.04	2.00e-36	145.00
IUUC-Hvu-047245	Hordeum vulgare	56.56	1.00e-37	149.00
IUUC-Lpe-051226	Leersia perrieri	57.14	4.00e-39	155.00
IUUC-Mtr-057911	Medicago truncatula	55.15	1.00e-34	139.00
IUUC-Mac-065494	Musa acuminata	61.03	4.00e-34	138.00
IUUC-Oba-075267	Oryza barthii	56.59	5.00e-39	154.00
IUUC-Ogl-077528	Oryza glaberrima	56.59	6.00e-39	154.00
IUUC-Ogu-078754	Oryza glumaepatula	57.58	8.00e-41	160.00
IUUC-Oin-079781	Oryza indica	57.58	8.00e-41	160.00
IUUC-Ome-081863	Oryza meridionalis	57.58	8.00e-41	160.00
IUUC-Oni-082943	Oryza nivara	57.58	8.00e-41	160.00
IUUC-Opu-083466	Oryza punctata	58.33	7.00e-41	160.00
IUUC-Oru-084675	Oryza rufipogon	57.58	8.00e-41	160.00
IUUC-Osa-085804	Oryza sativa	57.58	8.00e-41	160.00
IUUC-Pop-099148	Populus trichocarpa	57.04	1.00e-44	172.00
IUUC-Ppe-102095	Prunus persica	39.94	2.00e-39	155.00
IUUC-Sit-109970	Setaria italica	54.74	1.00e-40	159.00
IUUC-Sly-111677	Solanum lycopersicum	53.73	1.00e-39	156.00
IUUC-Stu-112327	Solanum tuberosum	48.63	5.00e-45	174.00
IUUC-Sbi-114529	Sorghum bicolor	57.46	2.00e-41	162.00
IUUC-Tca-121197	Theobroma cacao	53.28	5.00e-39	154.00
IUUC-Tae-123746	Triticum aestivum	56.56	1.00e-37	149.00
IUUC-Vvi-131553	Vitis vinifera	60.56	3.00e-44	171.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence