iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016940

Ensembl Protein ID

Bra000816.1-P

UniProt Accession

M4C9D7; M4C9D7_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra000816	Bra000816.1	Bra000816.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	7.30e-07	30.4	23	83

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 88   paptptpe.egpdaglldrlpeeilveilkll.dkeellraarvcrrwqelasqkalwktv 146
           p+p+ tpe ++ + +++++lp+e+  +il++l + e l +a++vc +w+++++++a+w+++
   Q: 23   PSPSLTPEmKDGEYSNWSELPTELTSSILQRLgPIEVLENAQKVCTSWRRVSKDPAMWRKI 83
           666677763345678899**************6666699*******************987 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MASSSLPLPS SSERLSLSFR SPPSPSLTPE MKDGEYSNWS ELPTELTSSI LQRLGPIEVL 60
ENAQKVCTSW RRVSKDPAMW RKIVMHKVEG LGCNLDIMCR HAVDRSQGGL VEIEIWDFGT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTCTT CCTCTCTGCC GTTGCCTTCT TCCTCGGAAC GGTTATCACT GAGTTTTCGT 60
TCTCCGCCGT CTCCGTCTTT GACTCCAGAG ATGAAAGACG GAGAATATAG TAACTGGTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like

PROSITE

PS50181--FBOX

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005502	Arabidopsis lyrata	63.94	4.00e-92	332.00
IUUC-Bdi-014562	Brachypodium distachyon	38.05	1.00e-38	153.00
IUUC-Lpe-051562	Leersia perrieri	41.07	8.00e-47	183.00
IUUC-Oba-075066	Oryza barthii	42.79	6.00e-40	158.00
IUUC-Ogl-077479	Oryza glaberrima	39.44	4.00e-42	164.00
IUUC-Ogu-078215	Oryza glumaepatula	39.11	2.00e-39	156.00
IUUC-Oin-079411	Oryza indica	39.04	2.00e-41	162.00
IUUC-Ome-081759	Oryza meridionalis	38.49	3.00e-40	160.00
IUUC-Oni-082766	Oryza nivara	33.73	1.00e-31	131.00
IUUC-Oru-084990	Oryza rufipogon	37.46	1.00e-40	161.00
IUUC-Osa-085658	Oryza sativa	39.04	2.00e-41	162.00
IUUC-Pfo-097279	Poecilia formosa	22.62	3.00e-05	42.70
IUUC-Tae-125315	Triticum aestivum	34.20	2.00e-35	142.00
IUUC-Tur-126585	Triticum urartu	34.38	4.00e-15	74.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence