iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016810

Ensembl Protein ID

Bra035608.1-P

UniProt Accession

M4F3F8; M4F3F8_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra035608	Bra035608.1	Bra035608.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-06	28.3	315	347

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ ++  ++++G+ D+t+++WD+r
   Q: 315  GHLDYSFASAWhPNgVTFATGNQDKTCRIWDTR 347
           799999999***777999*************87 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MFGYNETEDE YMADEYDMDD LEDEMNAEFD ARDIDASDSE VEDFEQLNKA ADTSAAQARN 60
GKDIQGIPWD RLSVTRKDYR KTRLEQYKNY ENVPHSGEEA GKHCTDTEKG SSFYTFRSNS 120

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Nucleotide Sequence
(Fasta)

ATGTTTGGTT ACAATGAAAC TGAAGATGAA TATATGGCTG ATGAATACGA CATGGATGAT 60
TTGGAGGATG AGATGAATGC AGAGTTTGAT GCTAGAGATA TCGATGCGTC TGATTCTGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001117	Aegilops tauschii	69.64	0.00e+00	632.00
IUUC-Atr-003022	Amborella trichopoda	71.88	0.00e+00	645.00
IUUC-Aly-006558	Arabidopsis lyrata	92.34	0.00e+00	780.00
IUUC-Ath-006618	Arabidopsis thaliana	93.05	0.00e+00	785.00
IUUC-Bdi-014834	Brachypodium distachyon	70.84	0.00e+00	639.00
IUUC-Bol-016279	Brassica oleracea	93.48	0.00e+00	853.00
IUUC-Gma-043054	Glycine max	70.84	0.00e+00	665.00
IUUC-Hvu-047631	Hordeum vulgare	61.89	1.00e-159	555.00
IUUC-Lpe-050907	Leersia perrieri	66.43	2.00e-167	581.00
IUUC-Mtr-058694	Medicago truncatula	67.79	0.00e+00	638.00
IUUC-Mac-065126	Musa acuminata	69.96	0.00e+00	643.00
IUUC-Oba-075716	Oryza barthii	70.29	0.00e+00	628.00
IUUC-Obr-076195	Oryza brachyantha	62.50	2.00e-164	572.00
IUUC-Ogl-077272	Oryza glaberrima	69.62	4.00e-180	624.00
IUUC-Ogu-078041	Oryza glumaepatula	70.05	0.00e+00	627.00
IUUC-Oin-079991	Oryza indica	61.94	3.00e-164	571.00
IUUC-Olo-080659	Oryza longistaminata	57.87	5.00e-140	490.00
IUUC-Ome-081872	Oryza meridionalis	60.96	2.00e-155	541.00
IUUC-Oni-082371	Oryza nivara	70.05	0.00e+00	627.00
IUUC-Opu-083680	Oryza punctata	62.26	1.00e-164	572.00
IUUC-Oru-085156	Oryza rufipogon	70.05	0.00e+00	628.00
IUUC-Osa-086197	Oryza sativa	70.05	0.00e+00	628.00
IUUC-Pop-099666	Populus trichocarpa	68.53	0.00e+00	649.00
IUUC-Pte-104305	Pyrenophora teres	29.05	3.00e-45	176.00
IUUC-Sit-110341	Setaria italica	70.94	8.00e-171	592.00
IUUC-Sly-111343	Solanum lycopersicum	71.43	0.00e+00	669.00
IUUC-Stu-112207	Solanum tuberosum	74.87	0.00e+00	656.00
IUUC-Sbi-113791	Sorghum bicolor	69.78	0.00e+00	630.00
IUUC-Tca-121187	Theobroma cacao	76.08	0.00e+00	690.00
IUUC-Tae-123332	Triticum aestivum	66.75	1.00e-166	578.00
IUUC-Tur-126622	Triticum urartu	63.04	2.00e-176	611.00
IUUC-Vvi-131183	Vitis vinifera	71.53	0.00e+00	681.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence