iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Tag

Content

iUUCD ID

IUUC-Bra-017514

Ensembl Protein ID

UniProt Accession

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra021702	Bra021702.1	Bra021702.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	53.06	1.00e-105	380.00	IUUC-Ath-007075

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MKSRRRNVSE GHNTILQCHS RTCTEEYSET IPHDLIIEIV SRLPTKSVAR CRCVSKLWSS 60
LLVHPYFTET YLTRSSASPK ILFACVKDGK VSFYTSPQPD DDKASSPITA AAATYHMNFP 120

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Nucleotide Sequence
(Fasta)

ATGAAATCAC GTCGGAGAAA CGTCTCTGAG GGCCATAATA CGATCCTTCA ATGCCATTCA 60
CGAACATGCA CCGAAGAATA CTCAGAGACA ATCCCACATG ATCTCATAAT CGAGATAGTT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013187--F-box-assoc_dom_typ3
IPR017451--F-box-assoc_interact_dom
IPR001810--F-box_dom

Pfam

PF00646--F-box
PF08268--FBA_3

SMART

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000580	Aegilops tauschii	25.36	6.00e-05	42.00
IUUC-Aly-006099	Arabidopsis lyrata	47.14	2.00e-84	306.00
IUUC-Ath-007075	Arabidopsis thaliana	53.06	6.00e-107	380.00
IUUC-Ago-007793	Ashbya gossypii	39.39	5.60e-02	32.70
IUUC-Bdi-014737	Brachypodium distachyon	24.29	5.00e-10	59.30
IUUC-Bol-016117	Brassica oleracea	51.94	3.00e-85	308.00
IUUC-Lpe-051707	Leersia perrieri	25.30	2.00e-06	46.60
IUUC-Mor-057138	Magnaporthe oryzae	29.63	4.10e-02	33.50
IUUC-Mmr-061741	Microcebus murinus	28.74	4.40e-02	31.60
IUUC-Ogu-078502	Oryza glumaepatula	24.33	3.00e-08	52.40
IUUC-Olo-080682	Oryza longistaminata	24.00	4.00e-12	67.00
IUUC-Ome-081354	Oryza meridionalis	26.32	3.00e-13	70.50
IUUC-Pop-098871	Populus trichocarpa	25.28	3.00e-17	82.80
IUUC-Smo-108920	Selaginella moellendorffii	22.73	2.00e-06	47.00

Created Date

25-Jun-2017

Protein Fasta Sequence