iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099120

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000345

Gene Name

POPTRDRAFT_722755; POPTR_0009s06840g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s06840	POPTR_0009s06840.1	POPTR_0009s06840.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/A20	56.76	8.00e-42	166.00	IUUC-Ath-007193

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAQRAEKEET EFKVPETLTS CINNCGVTGN PATNNMCQKC FNASTSTSNS SSSSTATSMT 60
FAATATSVSN NEILKFTGEK SARSSISRSL VKDPQKSPET ASDKERSCAY HVAKKEVNRC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCCCCCCC CCATCTCTCT CTTCACTAGC ACCAAACCCC AACCTCTCTC TCTTCTCTCT 60
CAGAACTAAA ACAAGAAACC CTCACAACAA CTCAAGAATT CTTCGATTCC GAATTCTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR002653--Znf_A20
IPR000058--Znf_AN1

PROSITE

PS51036--ZF_A20
PS51039--ZF_AN1

Pfam

PF01754--zf-A20
PF01428--zf-AN1

SMART

SM00259--ZnF_A20
SM00154--ZnF_AN1

Gene Ontology

GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0009s06840g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001022	Aegilops tauschii	45.60	2.00e-34	137.00
IUUC-Atr-002550	Amborella trichopoda	54.21	4.00e-28	116.00
IUUC-Aly-006127	Arabidopsis lyrata	58.06	3.00e-44	170.00
IUUC-Ath-007193	Arabidopsis thaliana	59.49	1.00e-41	161.00
IUUC-Bdi-014732	Brachypodium distachyon	84.62	4.00e-23	100.00
IUUC-Bol-016379	Brassica oleracea	58.47	1.00e-49	187.00
IUUC-Bra-016759	Brassica rapa	56.60	2.00e-41	160.00
IUUC-Csv-025895	Ciona savignyi	33.33	9.80e-01	26.90
IUUC-Gma-043029	Glycine max	59.78	4.00e-51	192.00
IUUC-Mtr-058331	Medicago truncatula	49.20	1.00e-39	154.00
IUUC-Mac-064849	Musa acuminata	51.09	1.00e-33	134.00
IUUC-Oba-075925	Oryza barthii	83.87	9.00e-28	115.00
IUUC-Ogl-077095	Oryza glaberrima	83.87	9.00e-28	115.00
IUUC-Ogu-078649	Oryza glumaepatula	83.87	9.00e-28	115.00
IUUC-Oin-079398	Oryza indica	83.87	9.00e-28	115.00
IUUC-Ome-081188	Oryza meridionalis	83.87	9.00e-28	115.00
IUUC-Oni-082989	Oryza nivara	83.87	9.00e-28	115.00
IUUC-Opu-084150	Oryza punctata	45.86	6.00e-35	139.00
IUUC-Oru-084798	Oryza rufipogon	83.87	9.00e-28	115.00
IUUC-Osa-086093	Oryza sativa	83.87	9.00e-28	115.00
IUUC-Ppe-101754	Prunus persica	64.80	2.00e-54	204.00
IUUC-Sly-111918	Solanum lycopersicum	62.37	4.00e-54	203.00
IUUC-Stu-112079	Solanum tuberosum	59.28	7.00e-50	189.00
IUUC-Tca-121297	Theobroma cacao	93.94	3.00e-33	134.00
IUUC-Tae-123362	Triticum aestivum	48.07	6.00e-34	135.00
IUUC-Tme-127203	Tuber melanosporum	30.00	2.70e-02	33.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence