iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005638

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

NEDD8-conjugating enzyme Ubc12

Genbank Nucleotide ID

GL348719

Gene Name

RCE1; ARALYDRAFT_912682

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_700424.1	scaffold_700424.1	scaffold_700424.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	2.00e-37	128.8	34	167

Active Site

Position(s)	Description	Evidence
113	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekW 92
           Rl+k+++el+  ++ +is    ++ dl+++ev i  p+d +Y++g+F +++++++ YP ++Pkvk+ tk++hPn++ +G+vCl+il+  e+W
   Q: 34   RLHKDISELNLPSSCSISFPNGKD-DLMNFEVSIK-PDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILR--EDW 121
           899*****9766666666655555.8*********.**************************************************9..*** PP
   S: 93   spalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           +p+l++++v++++  l++epn e+pln++aa  l++n++ ++++vr
   Q: 122  KPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVR 167
           ********************************************98 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MIGLFKVKEK QREQAQNATR GGASVKKQSA GELRLHKDIS ELNLPSSCSI SFPNGKDDLM 60
NFEVSIKPDD GYYHNGTFVF TFQVSPVYPH EAPKVKCKTK VYHPNIDLEG NVCLNILRED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTTTCTTAA GAAGTGAGAA GCAATGATTG GGTTATTTAA AGTTAAGGAA AAGCAAAGAG 60
AACAAGCTCA AAATGCTACT AGAGGAGGAG CTTCTGTTAA GAAGCAATCT GCTGGCGAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding
GO:0009733--P:response to auxin

KEGG

aly:ARALYDRAFT_912682

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000196	Aegilops tauschii	78.23	4.00e-69	252.00
IUUC-Atr-003170	Amborella trichopoda	86.41	3.00e-94	336.00
IUUC-Ath-006876	Arabidopsis thaliana	100.00	2.00e-109	386.00
IUUC-Afl-008463	Aspergillus flavus	56.58	3.00e-48	183.00
IUUC-Ani-009422	Aspergillus nidulans	57.24	2.00e-49	187.00
IUUC-Aor-009962	Aspergillus oryzae	56.58	3.00e-48	183.00
IUUC-Ate-010430	Aspergillus terreus	53.42	8.00e-44	169.00
IUUC-Bgr-012306	Blumeria graminis	51.67	2.00e-53	200.00
IUUC-Bci-013626	Botrytis cinerea	50.00	6.00e-53	199.00
IUUC-Bdi-014528	Brachypodium distachyon	78.14	2.00e-81	293.00
IUUC-Bol-015241	Brassica oleracea	97.84	1.00e-106	377.00
IUUC-Bra-016704	Brassica rapa	97.84	1.00e-106	377.00
IUUC-Cre-022865	Chlamydomonas reinhardtii	63.27	1.00e-53	201.00
IUUC-Dor-030851	Dipodomys ordii	39.52	1.00e-28	118.00
IUUC-Dse-031265	Dothistroma septosporum	55.43	2.00e-53	201.00
IUUC-Ete-032350	Echinops telfairi	47.37	1.00e-27	113.00
IUUC-Fox-037877	Fusarium oxysporum	52.75	3.00e-47	180.00
IUUC-Fso-038428	Fusarium solani	52.75	3.00e-51	193.00
IUUC-Ggr-039731	Gaeumannomyces graminis	50.00	1.00e-47	181.00
IUUC-Gma-043805	Glycine max	87.50	4.00e-96	342.00
IUUC-Hvu-047056	Hordeum vulgare	74.86	1.00e-81	294.00
IUUC-Kpa-049315	Komagataella pastoris	46.89	8.00e-46	175.00
IUUC-Lpe-050743	Leersia perrieri	81.50	4.00e-82	296.00
IUUC-Lma-053001	Leptosphaeria maculans	56.58	2.00e-47	181.00
IUUC-Mtr-058251	Medicago truncatula	85.87	6.00e-95	338.00
IUUC-Mla-059119	Melampsora laricipopulina	51.11	2.00e-50	191.00
IUUC-Mvi-060449	Microbotryum violaceum	57.72	1.00e-49	188.00
IUUC-Mac-064967	Musa acuminata	83.15	2.00e-90	324.00
IUUC-Ncr-068944	Neurospora crassa	59.21	3.00e-50	190.00
IUUC-Ont-072348	Oreochromis niloticus	61.08	4.00e-66	243.00
IUUC-Oba-075825	Oryza barthii	81.42	7.00e-88	315.00
IUUC-Obr-076067	Oryza brachyantha	80.87	2.00e-87	314.00
IUUC-Ogl-077594	Oryza glaberrima	81.42	7.00e-88	315.00
IUUC-Ogu-078073	Oryza glumaepatula	81.42	7.00e-88	315.00
IUUC-Olo-080314	Oryza longistaminata	81.42	5.00e-88	315.00
IUUC-Ome-081713	Oryza meridionalis	81.42	6.00e-88	315.00
IUUC-Oni-082426	Oryza nivara	81.42	7.00e-88	315.00
IUUC-Opu-083942	Oryza punctata	81.61	5.00e-83	298.00
IUUC-Oru-085104	Oryza rufipogon	81.42	7.00e-88	315.00
IUUC-Osa-086168	Oryza sativa	81.42	7.00e-88	315.00
IUUC-Olu-087854	Ostreococcus lucimarinus	61.96	8.00e-64	235.00
IUUC-Pno-094972	Phaeosphaeria nodorum	52.50	3.00e-44	170.00
IUUC-Ppa-095439	Physcomitrella patens	72.28	2.00e-79	287.00
IUUC-Pop-099484	Populus trichocarpa	85.87	1.00e-95	340.00
IUUC-Ppe-101216	Prunus persica	85.87	8.00e-88	315.00
IUUC-Pgr-103675	Puccinia graminis	50.00	3.00e-49	187.00
IUUC-Ptt-103997	Puccinia triticina	50.00	8.00e-50	188.00
IUUC-Sce-106385	Saccharomyces cerevisiae	47.37	3.00e-37	147.00
IUUC-Sja-107789	Schizosaccharomyces japonicus	44.44	1.00e-41	161.00
IUUC-Spo-108143	Schizosaccharomyces pombe	46.41	2.00e-45	174.00
IUUC-Ssl-108427	Sclerotinia sclerotiorum	50.28	4.00e-50	189.00
IUUC-Smo-109330	Selaginella moellendorffii	68.48	1.00e-77	281.00
IUUC-Sit-109702	Setaria italica	79.78	1.00e-79	287.00
IUUC-Sly-111045	Solanum lycopersicum	84.78	2.00e-93	333.00
IUUC-Stu-112655	Solanum tuberosum	83.15	7.00e-92	328.00
IUUC-Sbi-114357	Sorghum bicolor	78.69	3.00e-78	283.00
IUUC-Tca-121359	Theobroma cacao	86.96	4.00e-95	339.00
IUUC-Tre-122115	Trichoderma reesei	55.97	4.00e-49	186.00
IUUC-Tvi-122656	Trichoderma virens	54.72	7.00e-48	182.00
IUUC-Tae-125117	Triticum aestivum	75.41	7.00e-82	295.00
IUUC-Tur-126125	Triticum urartu	74.86	2.00e-82	297.00
IUUC-Tbe-127874	Tupaia belangeri	42.93	4.00e-35	139.00
IUUC-Vvi-131182	Vitis vinifera	86.41	5.00e-95	339.00
IUUC-Yli-134467	Yarrowia lipolytica	53.89	6.00e-55	205.00
IUUC-Zma-135527	Zea mays	79.23	9.00e-79	285.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence