iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080514

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN539220.1_FG007	KN539220.1_FGT007	KN539220.1_FGP007

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	5.10e-06	27.2	415	479

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 72   pkaglrseaaaapapapaptptpeegpdaglldrlpeeilveilklldkeellraarvcrrwqelas 138
           pk g+rs   +        +p+   g+d++ +  lp+ +l++il++l++++ +r  + +rrw++l +
   Q: 415  PKKGFRSAGETGK--RVKGSPSRSGGADEDRIGCLPDGVLHHILGFLPAPDAVRTCLLARRWRHLWK 479
           6777777554443..34456778899*************************************7765 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MPPGKAPRPS ASGGGGGGVD RIGDLPDGVL QHILGFLPAP EAVRTCVLGR RWRHLWKSVA 60
RLHITNWDKE VTMQEFGYFV RRLLLHRGRG APIDECRFSL GGLSDFAADA RRVDRWFRHA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCTCCGG GGAAAGCCCC ACGTCCGAGC GCCAGCGGCG GCGGCGGCGG CGGCGTCGAT 60
AGGATAGGGG ATCTGCCGGA TGGTGTCCTC CAACACATCC TCGGTTTCCT CCCGGCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000724	Aegilops tauschii	29.75	3.00e-57	216.00
IUUC-Aly-006243	Arabidopsis lyrata	52.63	2.00e-08	52.80
IUUC-Ath-006752	Arabidopsis thaliana	25.10	3.00e-10	58.50
IUUC-Cel-018506	Caenorhabditis elegans	29.85	2.30e-01	29.60
IUUC-Oba-075776	Oryza barthii	82.82	0.00e+00	839.00
IUUC-Ogu-078253	Oryza glumaepatula	72.88	0.00e+00	1157.00
IUUC-Ome-081950	Oryza meridionalis	60.64	0.00e+00	837.00
IUUC-Oni-082377	Oryza nivara	82.35	0.00e+00	812.00
IUUC-Oru-085191	Oryza rufipogon	71.97	0.00e+00	1084.00
IUUC-Sce-106388	Saccharomyces cerevisiae	29.63	6.00e-03	35.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence