iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113831

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G175700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g021990	Sb08g021990.1	Sb08g021990.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.10e-08	33.7	101	143

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl ++   d ++vlp C H+fh+ C+ +w       + + +CP+Cr
   Q: 101  CAVCLGEYaaGDVLRVLPqCAHAFHQRCVDRW------LRLHPTCPVCR 143
           ********6655599999**************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MVELEAAFAV VSVLAVVTVA ALLRACSRRA APPARRRSSS SSSSSSQART AAAAVFVGGV 60
EDVEAGLDDA ALRTLPKVVY GEEKEDGAVA ATKKAPAAAC CAVCLGEYAA GDVLRVLPQC 120

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Nucleotide Sequence
(Fasta)

ATGGTGGAGC TGGAGGCGGC CTTCGCCGTC GTCAGCGTGC TGGCCGTGGT CACCGTGGCC 60
GCCCTGCTCC GCGCGTGCTC CCGCCGCGCC GCGCCGCCCG CGCGCCGGAG GTCTTCGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_08g021990

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ogl-077698	Oryza glaberrima	53.66	3.00e-16	75.50
IUUC-Oin-080189	Oryza indica	53.19	1.00e-19	86.30
IUUC-Ome-081751	Oryza meridionalis	52.05	4.00e-16	76.60
IUUC-Sit-109951	Setaria italica	79.01	5.00e-24	102.00
IUUC-Tae-124362	Triticum aestivum	51.04	5.00e-19	85.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence