iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000011293.2	ENSCJAT00000022052.2	ENSCJAP00000020862.2
ENSCJAG00000011293.2	ENSCJAT00000022084.2	ENSCJAP00000020892.2
ENSCJAG00000011293.2	ENSCJAT00000022074.2	ENSCJAP00000020882.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-36	123.1	206	243
UBD/Beta-Prp	5.40e-60	204.0	74	294

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H+  v+c++f +d ++++++s Dg+i+++D +tg +++
   Q: 206  HSRFVNCVRFsPDgNRFATASADGQIYIYDGKTGEKVC 243
           8888*******999****************99998765 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl..sgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvhtlkg 92
           +h +++ +  +sp++ ++a+g  +g++++wd+t++  l ++  +   ++++++ + +d+k ++ ++e   ++  v+  ++g+ v  ++g
   Q: 74   EHAHQVVVARYSPSGFYIASGDVSGKLRIWDTTQKEHLLKYeyQPFAGKIKDIAWTEDSKRIAVVGEGreKFGAVFLWDSGSSVGEITG 162
           45555666799***********************998777742334567***********99999999887777777789********* PP
   S: 93   hedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgg 178
           h++ + s+++ +s+ ++l++Gs+d+ +  ++ +  +    t   h+++vncv+++pdgn ++++s+D+++ ++d ktg+ +  l  +++
   Q: 163  HNKVINSVDIKQSRpYRLATGSDDNCAAFFEGPPFKFKF-TIGDHSRFVNCVRFSPDGNRFATASADGQIYIYDGKTGEKVCALggSKA 250
           ************999*****************9999998.99********************************************888 PP
   S: 179  htdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght 222
           h++ +y  s+++++++l+s+s d+t k+wd+  +++v  +   t
   Q: 251  HDGGIYAXSWSPDSTHLLSASGDKTSKIWDVNVNSVVSVFPMGT 294
           *******************************9998877665544 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

RAGSGGFRRA RRGNKWARMP YEIKKVFASL PQVERGVSKI IGGDPKGNNF LYTNGKCVIL 60
RNIDNPALAD IYTEHAHQVV VARYSPSGFY IASGDVSGKL RIWDTTQKEH LLKYEYQPFA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCAGCCGC CGAACCGAGT GCTTGACTAT ATATGGTCAA AGCTGGGGGC GAGCCGCGCG 60
CGGGGCCGCG CTTCCGGGTT CGGGGCGTCC GCAGCGGCAG CGCGCAGGGC AGGCGCGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011045--N2O_reductase_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005911--C:cell-cell junction
GO:0005829--C:cytosol
GO:0070062--C:extracellular exosome
GO:0043209--C:myelin sheath
GO:0030043--P:actin filament fragmentation
GO:0043297--P:apical junction assembly
GO:0030865--P:cortical cytoskeleton organization
GO:0042247--P:establishment of planar polarity of follicular epithelium
GO:0045199--P:maintenance of epithelial cell apical/basal polarity
GO:0002446--P:neutrophil mediated immunity
GO:1990266--P:neutrophil migration
GO:0030220--P:platelet formation
GO:0030836--P:positive regulation of actin filament depolymerization
GO:0008360--P:regulation of cell shape
GO:0060307--P:regulation of ventricular cardiac muscle cell membrane repolarization
GO:0045214--P:sarcomere organization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000457	Aegilops tauschii	35.34	3.00e-80	292.00
IUUC-Aml-002368	Ailuropoda melanoleuca	96.34	0.00e+00	1164.00
IUUC-Atr-003160	Amborella trichopoda	37.30	1.00e-113	403.00
IUUC-Apl-004012	Anas platyrhynchos	86.27	0.00e+00	1065.00
IUUC-Aca-004707	Anolis carolinensis	82.21	0.00e+00	1034.00
IUUC-Aly-006465	Arabidopsis lyrata	37.40	2.00e-109	389.00
IUUC-Ath-006740	Arabidopsis thaliana	37.38	9.00e-108	384.00
IUUC-Ago-007920	Ashbya gossypii	28.39	3.00e-71	262.00
IUUC-Acl-008262	Aspergillus clavatus	36.75	6.00e-106	377.00
IUUC-Afl-008471	Aspergillus flavus	30.37	5.00e-67	248.00
IUUC-Afu-008989	Aspergillus fumigatus	38.42	5.00e-95	341.00
IUUC-Ani-009167	Aspergillus nidulans	38.03	1.00e-114	407.00
IUUC-Ang-009595	Aspergillus niger	38.70	4.00e-102	365.00
IUUC-Aor-009908	Aspergillus oryzae	37.50	5.00e-103	368.00
IUUC-Ate-010580	Aspergillus terreus	38.35	4.00e-109	390.00
IUUC-Ame-011269	Astyanax mexicanus	59.75	7.00e-134	470.00
IUUC-Bgr-011996	Blumeria graminis	34.47	4.00e-106	378.00
IUUC-Bta-013278	Bos taurus	95.21	0.00e+00	1191.00
IUUC-Bci-013925	Botrytis cinerea	36.32	6.00e-107	381.00
IUUC-Bdi-014659	Brachypodium distachyon	36.45	5.00e-104	371.00
IUUC-Bol-016043	Brassica oleracea	35.78	9.00e-106	377.00
IUUC-Bra-017139	Brassica rapa	36.97	4.00e-108	385.00
IUUC-Cel-018417	Caenorhabditis elegans	40.80	2.00e-121	429.00
IUUC-Cfa-020225	Canis familiaris	95.87	0.00e+00	1174.00
IUUC-Cpo-021900	Cavia porcellus	94.34	0.00e+00	1157.00
IUUC-Csa-023028	Chlorocebus sabaeus	98.35	0.00e+00	1163.00
IUUC-Cho-025030	Choloepus hoffmanni	68.33	0.00e+00	754.00
IUUC-Cin-025152	Ciona intestinalis	55.21	9.00e-81	293.00
IUUC-Csv-025986	Ciona savignyi	38.71	1.00e-93	337.00
IUUC-Cgl-026597	Colletotrichum gloeosporioides	38.76	1.00e-111	397.00
IUUC-Cne-026814	Cryptococcus neoformans	34.57	1.00e-97	350.00
IUUC-Dre-027498	Danio rerio	80.00	2.00e-95	340.00
IUUC-Dno-029383	Dasypus novemcinctus	94.72	0.00e+00	1130.00
IUUC-Dor-030633	Dipodomys ordii	93.40	0.00e+00	1068.00
IUUC-Dse-031526	Dothistroma septosporum	38.71	2.00e-116	412.00
IUUC-Dme-031597	Drosophila melanogaster	48.43	8.00e-167	580.00
IUUC-Ete-032780	Echinops telfairi	83.28	0.00e+00	1021.00
IUUC-Eca-034306	Equus caballus	94.18	0.00e+00	1127.00
IUUC-Eeu-034531	Erinaceus europaeus	74.77	5.00e-133	467.00
IUUC-Fca-036301	Felis catus	96.84	0.00e+00	1192.00
IUUC-Fal-037361	Ficedula albicollis	86.78	0.00e+00	1108.00
IUUC-Fox-037924	Fusarium oxysporum	35.67	1.00e-98	353.00
IUUC-Fso-038199	Fusarium solani	35.45	4.00e-96	345.00
IUUC-Gmo-039238	Gadus morhua	71.99	0.00e+00	883.00
IUUC-Ggr-039830	Gaeumannomyces graminis	35.33	6.00e-95	341.00
IUUC-Gga-040235	Gallus gallus	88.14	0.00e+00	1092.00
IUUC-Gac-042363	Gasterosteus aculeatus	71.83	0.00e+00	917.00
IUUC-Gma-044189	Glycine max	37.38	3.00e-111	395.00
IUUC-Ggo-044632	Gorilla gorilla	95.88	0.00e+00	1130.00
IUUC-Hsa-045792	Homo sapiens	97.69	0.00e+00	1186.00
IUUC-Hvu-047517	Hordeum vulgare	35.56	8.00e-107	380.00
IUUC-Itr-048076	Ictidomys tridecemlineatus	95.67	0.00e+00	1159.00
IUUC-Kpa-049183	Komagataella pastoris	33.06	2.00e-83	303.00
IUUC-Lch-050428	Latimeria chalumnae	75.45	0.00e+00	994.00
IUUC-Lpe-051306	Leersia perrieri	36.50	2.00e-108	386.00
IUUC-Loc-052096	Lepisosteus oculatus	71.52	0.00e+00	900.00
IUUC-Lma-053313	Leptosphaeria maculans	39.44	8.00e-115	409.00
IUUC-Laf-054060	Loxodonta africana	92.43	0.00e+00	1125.00
IUUC-Mcc-055619	Macaca mulatta	96.24	0.00e+00	1135.00
IUUC-Meu-056689	Macropus eugenii	77.39	3.00e-178	618.00
IUUC-Mor-056940	Magnaporthe oryzae	35.66	7.00e-97	348.00
IUUC-Mpo-057557	Magnaporthe poae	28.53	2.00e-56	213.00
IUUC-Mtr-057922	Medicago truncatula	36.01	4.00e-108	385.00
IUUC-Mla-059103	Melampsora laricipopulina	33.10	6.00e-75	275.00
IUUC-Mga-060150	Meleagris gallopavo	87.75	0.00e+00	1077.00
IUUC-Mvi-060448	Microbotryum violaceum	31.28	1.00e-71	264.00
IUUC-Mmr-061226	Microcebus murinus	94.72	0.00e+00	1145.00
IUUC-Mdo-062674	Monodelphis domestica	91.91	0.00e+00	1136.00
IUUC-Mmu-064170	Mus musculus	94.72	0.00e+00	1164.00
IUUC-Mac-065124	Musa acuminata	38.30	7.00e-114	404.00
IUUC-Mpu-066001	Mustela putorius furo	92.53	0.00e+00	1155.00
IUUC-Mlu-067253	Myotis lucifugus	93.84	0.00e+00	1153.00
IUUC-Nfi-068550	Neosartorya fischeri	38.29	7.00e-110	391.00
IUUC-Ncr-068948	Neurospora crassa	36.66	6.00e-115	407.00
IUUC-Nle-070115	Nomascus leucogenys	93.74	0.00e+00	1062.00
IUUC-Opr-070254	Ochotona princeps	92.83	0.00e+00	1087.00
IUUC-Ont-071666	Oreochromis niloticus	74.92	0.00e+00	947.00
IUUC-Oan-073594	Ornithorhynchus anatinus	91.89	2.00e-167	581.00
IUUC-Ocu-074824	Oryctolagus cuniculus	93.56	0.00e+00	1115.00
IUUC-Oba-075010	Oryza barthii	36.72	5.00e-110	391.00
IUUC-Obr-076364	Oryza brachyantha	37.95	4.00e-110	392.00
IUUC-Ogl-077019	Oryza glaberrima	36.72	5.00e-110	391.00
IUUC-Ogu-078496	Oryza glumaepatula	36.72	5.00e-110	391.00
IUUC-Oin-080116	Oryza indica	36.89	2.00e-110	392.00
IUUC-Olo-080290	Oryza longistaminata	36.72	1.00e-109	390.00
IUUC-Ome-081969	Oryza meridionalis	36.72	8.00e-110	390.00
IUUC-Oni-082075	Oryza nivara	36.72	5.00e-110	391.00
IUUC-Opu-083959	Oryza punctata	36.76	5.00e-110	391.00
IUUC-Oru-084711	Oryza rufipogon	36.72	5.00e-110	391.00
IUUC-Osa-085958	Oryza sativa	36.89	2.00e-110	392.00
IUUC-Ola-086968	Oryzias latipes	75.45	0.00e+00	961.00
IUUC-Oga-089108	Otolemur garnettii	94.44	0.00e+00	1223.00
IUUC-Oar-089986	Ovis aries	89.51	0.00e+00	1095.00
IUUC-Ptr-091281	Pan troglodytes	98.00	0.00e+00	1177.00
IUUC-Pan-092585	Papio anubis	98.51	0.00e+00	1165.00
IUUC-Psi-093811	Pelodiscus sinensis	85.88	0.00e+00	1099.00
IUUC-Pma-094542	Petromyzon marinus	68.86	0.00e+00	875.00
IUUC-Pno-095086	Phaeosphaeria nodorum	37.94	3.00e-108	385.00
IUUC-Ppa-095876	Physcomitrella patens	36.54	1.00e-110	394.00
IUUC-Pfo-096973	Poecilia formosa	74.59	0.00e+00	981.00
IUUC-Pab-098391	Pongo abelii	97.85	0.00e+00	1161.00
IUUC-Pop-098850	Populus trichocarpa	37.42	1.00e-111	397.00
IUUC-Pca-100257	Procavia capensis	60.26	2.00e-91	329.00
IUUC-Ppe-101578	Prunus persica	38.24	3.00e-114	405.00
IUUC-Pva-102872	Pteropus vampyrus	89.29	0.00e+00	1112.00
IUUC-Pgr-103593	Puccinia graminis	32.00	2.00e-77	283.00
IUUC-Pte-104365	Pyrenophora teres	39.64	9.00e-111	394.00
IUUC-Pyt-104689	Pyrenophora triticirepentis	39.48	6.00e-114	404.00
IUUC-Rno-105737	Rattus norvegicus	95.38	0.00e+00	1198.00
IUUC-Sce-106383	Saccharomyces cerevisiae	29.22	6.00e-66	245.00
IUUC-Sha-107084	Sarcophilus harrisii	89.66	0.00e+00	995.00
IUUC-Sja-107688	Schizosaccharomyces japonicus	35.96	2.00e-110	392.00
IUUC-Spo-108309	Schizosaccharomyces pombe	34.15	1.00e-95	343.00
IUUC-Ssl-108408	Sclerotinia sclerotiorum	35.99	3.00e-106	379.00
IUUC-Smo-109255	Selaginella moellendorffii	35.41	2.00e-100	359.00
IUUC-Sit-109962	Setaria italica	37.64	5.00e-112	398.00
IUUC-Sly-110897	Solanum lycopersicum	39.05	2.00e-115	409.00
IUUC-Stu-111971	Solanum tuberosum	39.05	7.00e-115	407.00
IUUC-Sar-113415	Sorex araneus	71.59	2.00e-105	375.00
IUUC-Sbi-114857	Sorghum bicolor	37.32	1.00e-109	390.00
IUUC-Sre-114900	Sporisorium reilianum	33.66	1.00e-90	327.00
IUUC-Tgu-117256	Taeniopygia guttata	86.71	0.00e+00	1103.00
IUUC-Tru-117871	Takifugu rubripes	70.08	0.00e+00	884.00
IUUC-Tsy-119172	Tarsius syrichta	96.25	3.00e-134	471.00
IUUC-Tni-120339	Tetraodon nigroviridis	69.74	0.00e+00	917.00
IUUC-Tca-121609	Theobroma cacao	37.95	3.00e-112	399.00
IUUC-Tre-122076	Trichoderma reesei	35.67	3.00e-91	329.00
IUUC-Tvi-122528	Trichoderma virens	34.65	1.00e-94	340.00
IUUC-Tae-123530	Triticum aestivum	35.95	8.00e-108	384.00
IUUC-Tur-126845	Triticum urartu	34.90	8.00e-79	287.00
IUUC-Tme-127217	Tuber melanosporum	35.96	3.00e-105	375.00
IUUC-Tbe-127526	Tupaia belangeri	93.07	0.00e+00	1142.00
IUUC-Ttr-128898	Tursiops truncatus	88.14	0.00e+00	1083.00
IUUC-Uma-129631	Ustilago maydis	32.14	5.00e-92	332.00
IUUC-Vda-129732	Verticillium dahliae	35.34	9.00e-92	330.00
IUUC-Vvi-131217	Vitis vinifera	38.05	1.00e-111	397.00
IUUC-Xtr-132860	Xenopus tropicalis	75.04	0.00e+00	943.00
IUUC-Xma-133830	Xiphophorus maculatus	74.59	0.00e+00	981.00
IUUC-Yli-134335	Yarrowia lipolytica	33.12	4.00e-76	278.00
IUUC-Zma-135907	Zea mays	37.32	2.00e-110	392.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence