iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006228

UUCD1 version

UUC-ArL-00720

Ensembl Protein ID

fgenesh2_kg.6__5__AT5G01980.1

UniProt Accession

D7M6D3; D7M6D3_ARALL

Genbank Protein ID

EFH49242.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_486871

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__5__AT5G01980.1	fgenesh2_kg.6__5__AT5G01980.1	fgenesh2_kg.6__5__AT5G01980.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-07	32.3	351	392

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+e f  ++++  lpC H++ha+C+  w       s + +CPlCr
   Q: 351  CAICKELFtlSNETTQLPCLHLYHAHCIVPW------LSARNSCPLCR 392
           ******9988666889***************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MESQPPGPSN GDSSNSIPSS ACNLCGRVVQ SASDDLEIFS LCVDCKFLLL EDFGTPAPPL 60
ARRQTIRRRR MRRRTRRSRH DSSESVGDLS TQQFTHLISM ARQSLSTVHA SEDQRDDQQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCCATCCG TCGTCGTTGA CCCCCTTTCC GCCATAAAAT CCCAACGCCT GTTTCTGCCA 60
TTTTCTTGCA TCGAAACTAT TCCCTTGTTT GCTTGGACAG ATGACTCCTT CCTAGTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_486871

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000512	Aegilops tauschii	34.29	2.00e-52	199.00
IUUC-Atr-002553	Amborella trichopoda	45.02	5.00e-58	218.00
IUUC-Ath-007294	Arabidopsis thaliana	90.40	0.00e+00	752.00
IUUC-Ame-011175	Astyanax mexicanus	46.74	1.00e-20	91.30
IUUC-Bdi-014671	Brachypodium distachyon	34.76	4.00e-50	192.00
IUUC-Bol-015156	Brassica oleracea	65.32	6.00e-150	523.00
IUUC-Bra-017773	Brassica rapa	63.13	4.00e-136	477.00
IUUC-Dre-028637	Danio rerio	47.83	2.00e-22	97.40
IUUC-Gma-044264	Glycine max	43.90	1.00e-97	349.00
IUUC-Hvu-047461	Hordeum vulgare	34.62	1.00e-53	203.00
IUUC-Lpe-051546	Leersia perrieri	35.22	4.00e-58	219.00
IUUC-Meu-056718	Macropus eugenii	37.76	4.00e-21	92.80
IUUC-Mtr-058205	Medicago truncatula	42.31	2.00e-89	322.00
IUUC-Obr-076852	Oryza brachyantha	37.06	1.00e-52	201.00
IUUC-Ogu-078441	Oryza glumaepatula	35.10	3.00e-59	222.00
IUUC-Oin-079290	Oryza indica	42.93	8.00e-41	159.00
IUUC-Olo-080680	Oryza longistaminata	34.55	8.00e-53	201.00
IUUC-Oni-082704	Oryza nivara	35.10	5.00e-59	221.00
IUUC-Opu-083695	Oryza punctata	36.72	1.00e-52	201.00
IUUC-Oru-085044	Oryza rufipogon	34.78	4.00e-53	202.00
IUUC-Osa-086033	Oryza sativa	35.10	3.00e-59	222.00
IUUC-Pfo-097473	Poecilia formosa	46.74	1.00e-21	94.70
IUUC-Pop-099046	Populus trichocarpa	42.88	5.00e-79	288.00
IUUC-Ppe-101517	Prunus persica	52.70	2.00e-81	295.00
IUUC-Smo-109226	Selaginella moellendorffii	59.66	3.00e-40	159.00
IUUC-Sit-110141	Setaria italica	36.59	9.00e-48	183.00
IUUC-Stu-112213	Solanum tuberosum	35.43	9.00e-52	197.00
IUUC-Tca-121683	Theobroma cacao	37.98	7.00e-63	234.00
IUUC-Tae-124029	Triticum aestivum	32.81	1.00e-55	210.00
IUUC-Tur-126513	Triticum urartu	33.57	1.00e-50	193.00
IUUC-Xma-133809	Xiphophorus maculatus	46.74	1.00e-21	94.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence