iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oni-082411

Ensembl Protein ID

ONIVA01G06790.1

UniProt Accession

A0A0E0FHH4; A0A0E0FHH4_ORYNI

Protein Name

Eukaryotic translation initiation factor 3 subunit I

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ONIVA01G06790	ONIVA01G06790.1	ONIVA01G06790.1
ONIVA01G06790	ONIVA01G06790.2	ONIVA01G06790.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.70e-26	90.9	50	87
UBD/Beta-Prp	3.80e-41	142.4	6	285

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++ v++++   d t+l++Gs D t k+WD+ tg+ l
   Q: 50   GHNGAVWSCDVsRDsTRLITGSADQTAKLWDVQTGREL 87
           8***********777*******************9876 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.......... 131
           ++ghe + t +++++dg++l ++++D+t +vw  ++g+ + t++gh+  v+s+++s+++ +l++Gs+d+t+++wd++tg +l +          
   Q: 6    MKGHERPLTFLRYNRDGDLLFSCAKDHTPNVWFADNGDRLGTYRGHNGAVWSCDVSRDSTRLITGSADQTAKLWDVQTGRELFTfrfdaparsv 99
           4899999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 PP
   S: 132  .....................................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl...tgghtdsvys 185
                                                + +g +g +n +v+ p ++ +++++ D t+r+Wd +tg++l++    + gh++ ++s
   Q: 100  efaigdglavittdnfmenvptaqcvvvdaeseesllVITGIKGRINRAVWGPLNRTIITAGEDATIRIWDTETGQCLKESdkeQ-GHQKTITS 192
           99999999999999999999999999999***99999*********************************************955.5******* PP
   S: 186  lsfdsngkelvsgsldgtvklwdlqtgec..........................vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlr 252
           ls + +  ++++gsld++ klwd +t +                           +  ++gh  +++ ++f p++  + sg++Dg +r++  +
   Q: 193  LSKSADWSHFLTGSLDKSAKLWDTRTLTLiktyvterpvnavdisplldhilqeeIGGVKGHFGPINALAFNPDGRSFSSGGEDGYVRLHHFD 285
           *************************77773333333344555555555555555555555555*************************98444 PP

Organism

Oryza nivara

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILMKGHE RPLTFLRYNR DGDLLFSCAK DHTPNVWFAD NGDRLGTYRG HNGAVWSCDV 60
SRDSTRLITG SADQTAKLWD VQTGRELFTF RFDAPARSVE FAIGDGLAVI TTDNFMENVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGCCGA TCCTGATGAA GGGGCACGAG CGCCCGCTCA CGTTCCTCCG GTACAACCGC 60
GACGGGGACC TCCTCTTCTC CTGCGCCAAG GACCACACCC CCAACGTCTG GTTCGCCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001321	Ailuropoda melanoleuca	39.82	3.00e-68	251.00
IUUC-Atr-002468	Amborella trichopoda	64.02	6.00e-80	289.00
IUUC-Apl-003841	Anas platyrhynchos	40.12	4.00e-69	254.00
IUUC-Aca-005123	Anolis carolinensis	39.70	5.00e-70	257.00
IUUC-Aly-005473	Arabidopsis lyrata	68.90	2.00e-129	454.00
IUUC-Ath-007094	Arabidopsis thaliana	67.99	3.00e-128	450.00
IUUC-Ago-008000	Ashbya gossypii	35.82	4.00e-56	211.00
IUUC-Acl-008098	Aspergillus clavatus	38.67	3.00e-60	224.00
IUUC-Afl-008494	Aspergillus flavus	38.84	3.00e-64	238.00
IUUC-Afu-009080	Aspergillus fumigatus	37.76	2.00e-60	225.00
IUUC-Ani-009230	Aspergillus nidulans	39.14	6.00e-63	233.00
IUUC-Aor-010114	Aspergillus oryzae	38.84	3.00e-64	238.00
IUUC-Ate-010285	Aspergillus terreus	38.53	2.00e-61	229.00
IUUC-Ame-011534	Astyanax mexicanus	40.06	3.00e-71	261.00
IUUC-Bgr-012121	Blumeria graminis	36.81	1.00e-56	213.00
IUUC-Bta-013143	Bos taurus	40.00	8.00e-69	253.00
IUUC-Bci-013950	Botrytis cinerea	39.82	1.00e-64	239.00
IUUC-Bdi-015019	Brachypodium distachyon	78.22	3.00e-147	513.00
IUUC-Bol-015709	Brassica oleracea	68.48	3.00e-129	455.00
IUUC-Bra-017760	Brassica rapa	68.48	2.00e-130	459.00
IUUC-Cel-018226	Caenorhabditis elegans	35.60	4.00e-55	207.00
IUUC-Cja-019741	Callithrix jacchus	39.70	1.00e-68	252.00
IUUC-Cfa-021204	Canis familiaris	39.51	7.00e-68	249.00
IUUC-Cpo-021661	Cavia porcellus	39.51	6.00e-68	250.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	46.48	8.00e-82	296.00
IUUC-Csa-024038	Chlorocebus sabaeus	39.70	1.00e-68	252.00
IUUC-Cin-025597	Ciona intestinalis	42.81	1.00e-72	266.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	38.18	1.00e-59	222.00
IUUC-Cne-026838	Cryptococcus neoformans	36.17	4.00e-58	218.00
IUUC-Cme-027304	Cyanidioschyzon merolae	47.53	4.00e-80	290.00
IUUC-Dre-028567	Danio rerio	39.70	5.00e-71	260.00
IUUC-Dno-029171	Dasypus novemcinctus	39.82	1.00e-67	250.00
IUUC-Dse-031191	Dothistroma septosporum	36.56	1.00e-60	226.00
IUUC-Dme-031879	Drosophila melanogaster	41.85	5.00e-73	266.00
IUUC-Ete-032336	Echinops telfairi	29.86	6.00e-25	106.00
IUUC-Eca-033259	Equus caballus	39.51	9.00e-68	249.00
IUUC-Fca-036489	Felis catus	39.51	9.00e-68	249.00
IUUC-Fal-037485	Ficedula albicollis	39.82	5.00e-69	253.00
IUUC-Fox-037860	Fusarium oxysporum	38.53	1.00e-61	229.00
IUUC-Fso-038188	Fusarium solani	38.96	8.00e-61	226.00
IUUC-Gmo-039311	Gadus morhua	38.91	2.00e-68	251.00
IUUC-Ggr-040045	Gaeumannomyces graminis	39.88	5.00e-62	230.00
IUUC-Gga-040645	Gallus gallus	39.35	1.00e-67	249.00
IUUC-Gac-042086	Gasterosteus aculeatus	40.12	1.00e-69	256.00
IUUC-Gma-043246	Glycine max	75.23	3.00e-141	493.00
IUUC-Ggo-045578	Gorilla gorilla	39.70	1.00e-68	252.00
IUUC-Hsa-046734	Homo sapiens	39.70	1.00e-68	252.00
IUUC-Hvu-047553	Hordeum vulgare	78.53	5.00e-148	516.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	39.51	1.00e-67	249.00
IUUC-Kpa-049325	Komagataella pastoris	40.67	9.00e-64	236.00
IUUC-Lch-049620	Latimeria chalumnae	39.67	2.00e-61	228.00
IUUC-Lpe-051338	Leersia perrieri	81.67	7.00e-147	512.00
IUUC-Loc-052094	Lepisosteus oculatus	39.94	3.00e-69	254.00
IUUC-Lma-053047	Leptosphaeria maculans	39.57	4.00e-64	237.00
IUUC-Laf-053801	Loxodonta africana	39.63	1.00e-65	242.00
IUUC-Mcc-055498	Macaca mulatta	34.55	3.00e-49	187.00
IUUC-Meu-056729	Macropus eugenii	35.84	2.00e-59	222.00
IUUC-Mor-057025	Magnaporthe oryzae	39.38	1.00e-59	222.00
IUUC-Mpo-057511	Magnaporthe poae	41.10	3.00e-62	231.00
IUUC-Mtr-058051	Medicago truncatula	73.62	4.00e-139	486.00
IUUC-Mla-059061	Melampsora laricipopulina	38.34	7.00e-63	233.00
IUUC-Mga-059229	Meleagris gallopavo	39.58	8.00e-67	246.00
IUUC-Mvi-060399	Microbotryum violaceum	37.90	8.00e-60	223.00
IUUC-Mmr-060764	Microcebus murinus	40.00	3.00e-69	254.00
IUUC-Mdo-062088	Monodelphis domestica	38.97	2.00e-68	251.00
IUUC-Mmu-064304	Mus musculus	39.70	8.00e-69	253.00
IUUC-Mac-065520	Musa acuminata	72.59	2.00e-135	474.00
IUUC-Mpu-066340	Mustela putorius furo	39.51	9.00e-68	249.00
IUUC-Mlu-067111	Myotis lucifugus	39.70	3.00e-68	251.00
IUUC-Nfi-068478	Neosartorya fischeri	38.07	3.00e-61	228.00
IUUC-Ncr-068820	Neurospora crassa	40.31	2.00e-61	228.00
IUUC-Nle-069903	Nomascus leucogenys	39.51	4.00e-68	250.00
IUUC-Opr-070221	Ochotona princeps	38.79	6.00e-66	243.00
IUUC-Ont-071765	Oreochromis niloticus	40.30	2.00e-71	261.00
IUUC-Oan-073660	Ornithorhynchus anatinus	37.37	5.00e-56	210.00
IUUC-Ocu-074039	Oryctolagus cuniculus	39.51	6.00e-68	250.00
IUUC-Oba-075395	Oryza barthii	96.63	1.00e-169	587.00
IUUC-Obr-076334	Oryza brachyantha	81.60	5.00e-151	526.00
IUUC-Ogl-077751	Oryza glaberrima	88.04	3.00e-165	573.00
IUUC-Ogu-078010	Oryza glumaepatula	96.63	1.00e-169	587.00
IUUC-Oin-079878	Oryza indica	86.20	3.00e-161	560.00
IUUC-Olo-080677	Oryza longistaminata	87.96	4.00e-137	480.00
IUUC-Opu-083136	Oryza punctata	87.73	9.00e-165	572.00
IUUC-Oru-084916	Oryza rufipogon	83.88	2.00e-159	554.00
IUUC-Osa-085776	Oryza sativa	88.04	3.00e-165	573.00
IUUC-Ola-087053	Oryzias latipes	40.30	5.00e-70	257.00
IUUC-Olu-087602	Ostreococcus lucimarinus	54.60	1.00e-99	355.00
IUUC-Oga-088154	Otolemur garnettii	39.82	2.00e-68	252.00
IUUC-Oar-089915	Ovis aries	39.82	5.00e-68	250.00
IUUC-Pan-092035	Papio anubis	39.70	1.00e-68	252.00
IUUC-Psi-094096	Pelodiscus sinensis	36.54	4.00e-36	143.00
IUUC-Pno-094988	Phaeosphaeria nodorum	36.00	2.00e-53	202.00
IUUC-Ppa-095536	Physcomitrella patens	67.48	3.00e-129	454.00
IUUC-Pfo-096101	Poecilia formosa	39.39	6.00e-70	256.00
IUUC-Pab-097726	Pongo abelii	39.70	1.00e-68	252.00
IUUC-Pop-099617	Populus trichocarpa	71.25	4.00e-133	466.00
IUUC-Pca-101014	Procavia capensis	40.00	5.00e-69	253.00
IUUC-Ppe-101320	Prunus persica	73.31	5.00e-138	483.00
IUUC-Pgr-103479	Puccinia graminis	38.96	2.00e-64	239.00
IUUC-Ptt-103981	Puccinia triticina	39.57	6.00e-66	243.00
IUUC-Pte-104278	Pyrenophora teres	38.65	2.00e-61	228.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	38.65	2.00e-61	228.00
IUUC-Rno-105867	Rattus norvegicus	36.23	2.00e-54	205.00
IUUC-Sce-106251	Saccharomyces cerevisiae	35.84	5.00e-57	214.00
IUUC-Sha-107039	Sarcophilus harrisii	38.97	2.00e-68	252.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	38.60	2.00e-64	238.00
IUUC-Spo-108314	Schizosaccharomyces pombe	41.10	4.00e-71	260.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	39.51	2.00e-64	238.00
IUUC-Smo-108728	Selaginella moellendorffii	66.25	1.00e-124	438.00
IUUC-Sit-110801	Setaria italica	81.29	2.00e-153	534.00
IUUC-Sly-111326	Solanum lycopersicum	70.86	2.00e-133	467.00
IUUC-Stu-112458	Solanum tuberosum	71.78	3.00e-134	470.00
IUUC-Sbi-114063	Sorghum bicolor	79.45	6.00e-151	526.00
IUUC-Sre-115096	Sporisorium reilianum	37.31	7.00e-56	210.00
IUUC-Ssc-116080	Sus scrofa	40.00	6.00e-69	253.00
IUUC-Tgu-116988	Taeniopygia guttata	39.82	5.00e-69	253.00
IUUC-Tru-118766	Takifugu rubripes	39.70	2.00e-70	258.00
IUUC-Tni-120197	Tetraodon nigroviridis	40.00	1.00e-70	259.00
IUUC-Tca-121316	Theobroma cacao	75.46	5.00e-141	493.00
IUUC-Tre-122097	Trichoderma reesei	40.00	1.00e-61	229.00
IUUC-Tvi-122442	Trichoderma virens	39.39	7.00e-61	226.00
IUUC-Tae-125800	Triticum aestivum	78.22	3.00e-147	514.00
IUUC-Tur-126334	Triticum urartu	68.10	7.00e-121	426.00
IUUC-Tme-127038	Tuber melanosporum	40.37	8.00e-67	246.00
IUUC-Ttr-128659	Tursiops truncatus	37.69	3.00e-51	194.00
IUUC-Uma-129464	Ustilago maydis	38.17	5.00e-56	210.00
IUUC-Vda-129841	Verticillium dahliae	39.33	9.00e-61	226.00
IUUC-Vvi-131076	Vitis vinifera	72.39	1.00e-138	485.00
IUUC-Xtr-132395	Xenopus tropicalis	41.52	3.00e-71	261.00
IUUC-Xma-133383	Xiphophorus maculatus	39.39	9.00e-70	256.00
IUUC-Yli-134586	Yarrowia lipolytica	39.09	4.00e-52	197.00
IUUC-Zma-135667	Zea mays	80.06	4.00e-152	530.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence