iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051623

Ensembl Protein ID

LPERR03G28040.1

UniProt Accession

A0A0D9VYS2; A0A0D9VYS2_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR03G28040	LPERR03G28040.1	LPERR03G28040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-32	111.3	232	270
UBD/Beta-Prp	8.40e-50	170.5	232	461

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           H+d v+cl+   +  +ll sGs+D t kvW++ + ++l 
   Q: 232  HSDAVSCLSPtdPAqGLLYSGSWDRTFKVWRIGDSKCLE 270
           9********9774479***************98888875 PP

UBD/Beta-Prp

   S: 9    hksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw..dls....tgkcvhtlkghed 95
           h++ ++c+    p + ll +gs+d+t kvw++ + k+l+s+  h++ v+a+    dg +  tgs D+t+kvw  +l+    +   v+tl ++e+
   Q: 232  HSDAVSCLSPtDPAQGLLYSGSWDRTFKVWRIGDSKCLESVVAHDDNVNAIVAAFDG-LVFTGSADGTVKVWrrELQgkgtKHVAVQTLLKQEH 324
           4445555555599999****************************************9.**************7766687767778889999999 PP
   S: 96   svlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrtltgghtdsvysls 187
            v +l+ s+   +l  Gs+d  ++ w+ e   +   +l+gh+++v c++  +   l+ sGs+D+t+ +W+      ++l  ltg ht+++++l+
   Q: 325  AVNALAASAVAPVLYCGSSDGLVNFWEGERHLVHGGVLRGHKKAVFCLAAAG--ALVLSGSADNTIYVWRRdgGVHSCLSVLTG-HTEPIRCLA 415
           99999999999***************8888777777**************99..***************8866889*******9.********* PP
   S: 188  .fdsng......................kelvsgsldgtvklwdlq 210
            +++n+                        + sgsld+++k+w + 
   Q: 416  iVEDNKdnaavpvdaaamadssggfgvrWIVYSGSLDKSIKVWRVA 461
           64444478888888888888899****88999***********985 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MRDHDGGGGD GAGSGLPRSH PSNLPLPNPH SDPNLQFSAT DDDFSNRHSS SSANGGASPG 60
YYSDYPSSFS GECSPYNMSP WNQTMASPWS HHSEASITGL GLGHGGAPAM APGTSLIGSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGAGATC ACGACGGGGG CGGCGGCGAT GGCGCCGGCA GCGGCCTCCC GCGGTCGCAC 60
CCATCAAACC TCCCGCTTCC CAATCCCCAC TCCGACCCGA ACCTCCAATT CTCCGCCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002457	Amborella trichopoda	61.42	1.00e-147	515.00
IUUC-Ath-006909	Arabidopsis thaliana	57.08	1.00e-139	489.00
IUUC-Bdi-014024	Brachypodium distachyon	86.13	0.00e+00	776.00
IUUC-Bol-015603	Brassica oleracea	59.02	2.00e-116	411.00
IUUC-Bra-017186	Brassica rapa	58.31	9.00e-139	486.00
IUUC-Gma-043481	Glycine max	57.43	3.00e-137	481.00
IUUC-Hvu-047445	Hordeum vulgare	84.27	0.00e+00	724.00
IUUC-Mtr-057641	Medicago truncatula	61.48	5.00e-140	490.00
IUUC-Mac-065282	Musa acuminata	57.57	5.00e-113	400.00
IUUC-Oba-075783	Oryza barthii	94.19	0.00e+00	837.00
IUUC-Obr-076198	Oryza brachyantha	93.15	0.00e+00	813.00
IUUC-Ogl-077280	Oryza glaberrima	94.19	0.00e+00	837.00
IUUC-Ogu-078924	Oryza glumaepatula	93.98	0.00e+00	861.00
IUUC-Oin-079931	Oryza indica	93.98	0.00e+00	833.00
IUUC-Olo-080744	Oryza longistaminata	94.20	0.00e+00	646.00
IUUC-Oni-082948	Oryza nivara	93.98	0.00e+00	833.00
IUUC-Opu-083881	Oryza punctata	93.78	0.00e+00	827.00
IUUC-Oru-084999	Oryza rufipogon	93.98	0.00e+00	833.00
IUUC-Osa-085749	Oryza sativa	93.98	0.00e+00	833.00
IUUC-Ppa-095309	Physcomitrella patens	43.43	7.00e-77	280.00
IUUC-Pop-099113	Populus trichocarpa	59.04	2.00e-142	498.00
IUUC-Ppe-101355	Prunus persica	61.54	3.00e-141	494.00
IUUC-Sit-109859	Setaria italica	87.27	0.00e+00	707.00
IUUC-Sly-111122	Solanum lycopersicum	58.90	3.00e-132	464.00
IUUC-Stu-112606	Solanum tuberosum	58.51	5.00e-136	476.00
IUUC-Sbi-114260	Sorghum bicolor	85.57	0.00e+00	743.00
IUUC-Tca-121208	Theobroma cacao	60.04	1.00e-143	502.00
IUUC-Tae-122837	Triticum aestivum	76.81	0.00e+00	699.00
IUUC-Tur-126539	Triticum urartu	83.49	1.00e-137	481.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence