iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002893

Ensembl Protein ID

ERN08314

UniProt Accession

W1PKP4; W1PKP4_AMBTC

Genbank Protein ID

ERN08314.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI393527

Gene Name

AMTR_s00156p00066850

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00156p00066850	ERN08314	ERN08314

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-29	101.4	239	268
UBD/Beta-Prp	3.40e-41	141.8	197	424

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H d vt++a+ ++ ++l ++s Dgtik+W 
   Q: 239  HDDAVTAVALnPEdGTLFTASSDGTIKLWK 268
           99*********77799*************6 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw....dlstgkcvhtlkghedsvlslsfsps 105
           h ++it++++++ + ll +gs d t++ w + +  ++ ++  h+++vtav ++p++ +l t+s+D+tik+w      s+ + ++tl+ + + v +l++ p 
   Q: 197  HRAPITSLAYHQAEGLLYSGSVDCTVRSWCAADARCIDCIAAHDDAVTAVALNPEDGTLFTASSDGTIKLWkrvwGQSAHTLTMTLRFQASPVNALALAPR 297
           789********************************************************************8777777999999999************** PP
   S: 106  gdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl...ktgkllrtltgghtdsvysls..fdsng....ke 194
           g +l sGs+d  ++ w+ e  +c ++   +l+gh+ +v c++  +  +++vsGs D t+r+W+    +  ++l  l+g h ++v +++  ++ +g      
   Q: 298  GRFLYSGSSDGFVNFWEKEGTSCRYNhggLLQGHRFAVLCLACAE--RIVVSGSEDATIRVWRReggSLHECLAVLEG-HRGPVGCVAawLEAEGgavgVV 395
           ***********************9999****************99..*****************55556667777788.*********9867777888899 PP
   S: 195  lvsgsldgtvklwdlq..tgecvrtlngh 221
           + sgsld+tvk+w l+  +g   ++++g 
   Q: 396  VYSGSLDRTVKVWRLSivNGGGEMKVEGE 424
           9*************998855445555554 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

METSSHRPEE SPYVPMDARM KQQHRFKEAT PEATSSSPSP SPSPYPSPSP SPSPKRASNF 60
SLVMSPCSSP ESPWSLSPLH RHPAPPHLLF RCVATLSAKD GNVLAIAVAK GAVFTGSESK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAACCA GCAGCCATCG TCCCGAAGAG AGTCCATACG TCCCCATGGA TGCACGCATG 60
AAGCAGCAGC ACCGCTTTAA AGAAGCAACG CCCGAGGCCA CAAGCTCAAG CCCAAGCCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001063	Aegilops tauschii	47.59	8.00e-66	243.00
IUUC-Bdi-014017	Brachypodium distachyon	42.82	2.00e-78	285.00
IUUC-Gma-044257	Glycine max	50.53	5.00e-110	389.00
IUUC-Lpe-051634	Leersia perrieri	47.04	1.00e-73	269.00
IUUC-Mtr-058235	Medicago truncatula	49.12	5.00e-108	384.00
IUUC-Mac-064451	Musa acuminata	51.02	6.00e-108	383.00
IUUC-Ogl-077347	Oryza glaberrima	47.38	6.00e-78	283.00
IUUC-Ogu-079043	Oryza glumaepatula	47.38	6.00e-78	283.00
IUUC-Oin-079372	Oryza indica	47.38	9.00e-78	283.00
IUUC-Ome-081348	Oryza meridionalis	47.27	2.00e-78	285.00
IUUC-Oni-082993	Oryza nivara	47.38	6.00e-78	283.00
IUUC-Opu-083517	Oryza punctata	46.60	3.00e-62	231.00
IUUC-Oru-085049	Oryza rufipogon	47.38	6.00e-78	283.00
IUUC-Osa-085538	Oryza sativa	47.38	1.00e-77	282.00
IUUC-Pop-100024	Populus trichocarpa	54.60	4.00e-109	387.00
IUUC-Ppe-101382	Prunus persica	49.46	2.00e-99	354.00
IUUC-Sit-110460	Setaria italica	44.86	3.00e-82	297.00
IUUC-Stu-112837	Solanum tuberosum	51.68	6.00e-116	409.00
IUUC-Sbi-113780	Sorghum bicolor	46.90	8.00e-74	270.00
IUUC-Tca-121243	Theobroma cacao	52.50	9.00e-121	425.00
IUUC-Tae-124336	Triticum aestivum	47.38	4.00e-79	287.00
IUUC-Vvi-131707	Vitis vinifera	55.59	2.00e-120	424.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence