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Tag Content
iUUCD ID IUUC-Stu-112837
Ensembl Protein ID PGSC0003DMT400024834
UniProt Accession M1AKN8; M1AKN8_SOLTU
Protein Name Uncharacterized protein
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400009600 PGSC0003DMT400024834 PGSC0003DMT400024834
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 7.10e-27 93.6 198 236
UBD/Beta-Prp 6.20e-52 177.9 197 441
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
    +H+d ++c+a+ ++ll +Gs+D+t+k W++++++++
   Q: 198 QHKDCISCMAYyhAEGLLYTGSWDKTVKAWRISDNRCVD 236
    5*********986559*******************9986 PP
   


   UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw......dlstgkcvht 89
    ++hk+ i+c+++ + ll tgs+d+t+k w++++ ++ s+ he+ v+++ ++++ t+s+D+ ik+w + t +++ +
   Q: 197 NQHKDCISCMAYYHAEGLLYTGSWDKTVKAWRISDNRCVDSFLAHEDNVNSIVVNQEDGCVFTCSSDGSIKIWrrvygqNSHTLTMTLK 285
    579**********************************************************************9998777777777777 PP
   S: 90 lkghedsvlslsfsp..sgdklvsGshdrtirvwdletgqclee.....tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
    ++ ++l+ls++ + +l sGs+d i+ w+ e+ + +l+gh+ +v c+v + +l++sGs D+t+r+W+ + g++
   Q: 286 FQPSPINALALSSNTsnATCFLYSGSSDGFINFWEKEKSSG--RfnhggFLQGHRFSVLCLVAIE--KLIFSGSEDTTIRVWRREEGSC 370
    77777777777777763448999***********6665554..34479**************999..********************** PP
   S: 172 lrtl...tgghtdsvysls..fdsng......kelvsgsldgtvklwdlq.....tgecvrtlnghtdnvksv 228
    ++ +h ++v++l+ + + + + s+sld+t k+w ++ ++++v++ ++n+ ++
   Q: 371 FHEClavLDAHRGPVKCLAatL--EIdkvvmgFLVYSASLDQTFKVWRIKvlpdhEEKVVNIISSSEENIEQL 441
    ***9999777*********661..44445566**********************8888898888888888765 PP
   

Organism Solanum tuberosum
Protein Sequence
(Fasta)
MEYYGKRSLH SYFDKERRSI QSPPRLSFNS HLKLSENHEV DHHLYSPSRS SNASAATMYS 60
LMPPPSPDSP WTLSPLQTPS PSLLYHCIAS LHRHEGTIYS IAVAKGIVFT GSESSRIRAW 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Stu-112837|E3,WD_repeat;UBD,Beta-Prp|Solanum tuberosum
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGAGTACT ATGGCAAGAG AAGCCTCCAT AGCTACTTTG ATAAAGAAAG AAGATCAATC 60
CAATCTCCTC CTCGTCTCTC CTTCAATTCT CATCTAAAAT TATCCGAAAA TCATGAAGTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Stu-112837|E3,WD_repeat;UBD,Beta-Prp|Solanum tuberosum
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001063 Aegilops tauschii 44.18 4.00e-83 300.00
IUUC-Atr-002893 Amborella trichopoda 51.68 3.00e-95 341.00
IUUC-Bdi-014017 Brachypodium distachyon 43.47 6.00e-98 350.00
IUUC-Gma-044257 Glycine max 64.83 6.00e-165 572.00
IUUC-Lpe-051634 Leersia perrieri 44.00 7.00e-91 326.00
IUUC-Mtr-058235 Medicago truncatula 63.21 5.00e-167 580.00
IUUC-Mac-064451 Musa acuminata 55.97 1.00e-131 461.00
IUUC-Ogl-077347 Oryza glaberrima 47.97 1.00e-96 346.00
IUUC-Ogu-079043 Oryza glumaepatula 47.97 1.00e-96 346.00
IUUC-Oin-079372 Oryza indica 47.97 8.00e-97 346.00
IUUC-Ome-081348 Oryza meridionalis 47.57 9.00e-97 346.00
IUUC-Oni-082993 Oryza nivara 47.97 1.00e-96 346.00
IUUC-Opu-083517 Oryza punctata 47.63 3.00e-77 281.00
IUUC-Oru-085049 Oryza rufipogon 47.97 1.00e-96 346.00
IUUC-Osa-085538 Oryza sativa 47.97 2.00e-96 345.00
IUUC-Pop-100024 Populus trichocarpa 68.13 7.00e-170 588.00
IUUC-Ppe-101382 Prunus persica 66.07 7.00e-148 515.00
IUUC-Sit-110460 Setaria italica 41.02 7.00e-104 369.00
IUUC-Sbi-113780 Sorghum bicolor 41.72 7.00e-94 336.00
IUUC-Tca-121243 Theobroma cacao 70.82 0.00e+00 688.00
IUUC-Tae-123251 Triticum aestivum 44.76 3.00e-99 354.00
IUUC-Vvi-131707 Vitis vinifera 70.89 0.00e+00 657.00
Created Date 25-Jun-2017

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