iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114647

Ensembl Protein ID

Sb03g043180.1

UniProt Accession

C5XFI0; C5XFI0_SORBI

Genbank Protein ID

EES01924.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G394400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g043180	Sb03g043180.1	Sb03g043180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	6.20e-09	36.4	66	134

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 5    vksldgs.eltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllek 72
           v+ ++g   ++++++ ++t+++LK +++  +g+ p++qrL+y+Gk+ +d+  L  +g++d ++++lle+
   Q: 66   VRVSTGWqWHDVSIDATATFGDLKVMLSLVTGLWPREQRLLYRGKERDDCEHLHMVGVQDKDKVLLLED 134
           6777777678999******************************************************87 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MVKIPSPRRL FRSRSRSTAT SVGSADICAM VAEHEKIEWE VRPGGMLVQK RRSPEEDAAA 60
VEYILVRVST GWQWHDVSID ATATFGDLKV MLSLVTGLWP REQRLLYRGK ERDDCEHLHM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGAAGA TTCCGAGCCC CAGGAGGCTG TTCAGGAGCC GGTCCAGGAG CACCGCCACC 60
AGCGTCGGCA GCGCGGACAT CTGCGCCATG GTCGCCGAGC ACGAGAAGAT CGAGTGGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

KEGG

sbi:SORBI_03g043180

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003060	Amborella trichopoda	56.56	3.00e-36	143.00
IUUC-Bdi-014042	Brachypodium distachyon	81.82	8.00e-52	194.00
IUUC-Lpe-051063	Leersia perrieri	83.33	8.00e-70	254.00
IUUC-Oba-075158	Oryza barthii	82.76	1.00e-67	248.00
IUUC-Obr-076702	Oryza brachyantha	83.73	6.00e-70	255.00
IUUC-Ogl-077853	Oryza glaberrima	82.76	1.00e-67	248.00
IUUC-Ogu-078318	Oryza glumaepatula	82.76	1.00e-67	248.00
IUUC-Oin-080095	Oryza indica	82.76	1.00e-67	248.00
IUUC-Olo-080712	Oryza longistaminata	82.76	9.00e-68	248.00
IUUC-Ome-081326	Oryza meridionalis	82.76	1.00e-67	248.00
IUUC-Oni-082186	Oryza nivara	82.76	1.00e-67	248.00
IUUC-Opu-083474	Oryza punctata	83.33	1.00e-67	248.00
IUUC-Oru-084770	Oryza rufipogon	82.76	1.00e-67	248.00
IUUC-Osa-085496	Oryza sativa	82.07	2.00e-67	247.00
IUUC-Pop-099115	Populus trichocarpa	59.57	4.00e-42	162.00
IUUC-Sit-110159	Setaria italica	96.89	1.00e-77	280.00
IUUC-Sly-110967	Solanum lycopersicum	59.35	2.00e-39	153.00
IUUC-Stu-112608	Solanum tuberosum	54.61	7.00e-40	155.00
IUUC-Tae-124659	Triticum aestivum	82.32	3.00e-66	243.00
IUUC-Tur-126839	Triticum urartu	79.75	1.00e-62	230.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence