iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114247

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G109700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g008970	Sb04g008970.1	Sb04g008970.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.00e-09	37.7	150	192

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cled ++g  ++ lp CgH+fh+dC+ +w         + +CPlCr
   Q: 150  CAVCLEDVQRGetVRRLPaCGHLFHKDCIDMW------LHSHTTCPLCR 192
           ********6666699999**************......99********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSSTTTIMLS AASSAGARSR SDDDDVECRT CYGVVVACVS LLLFCVLAAT AGVVKASAVT 60
GFTVVFFGIV GWLVPYGARG DAMGAAQRHD AGAASRVVVT ALRRAGYSCS PLGGAAAIDV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCAGTA CCACCACGAT TATGCTCTCC GCCGCGAGCT CGGCCGGCGC CCGCAGCCGC 60
AGCGATGACG ACGACGTCGA GTGCCGCACC TGCTACGGCG TCGTCGTGGC CTGCGTGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_04g008970

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014942	Brachypodium distachyon	43.43	3.00e-26	110.00
IUUC-Lpe-051704	Leersia perrieri	54.55	5.00e-42	163.00
IUUC-Obr-076333	Oryza brachyantha	66.15	2.00e-17	79.30
IUUC-Ogu-078905	Oryza glumaepatula	53.96	7.00e-40	160.00
IUUC-Oin-079862	Oryza indica	53.40	2.00e-43	168.00
IUUC-Ome-081480	Oryza meridionalis	57.95	9.00e-42	162.00
IUUC-Oni-082150	Oryza nivara	52.91	2.00e-42	166.00
IUUC-Opu-083204	Oryza punctata	58.38	3.00e-41	162.00
IUUC-Oru-084520	Oryza rufipogon	52.48	6.00e-40	159.00
IUUC-Osa-086184	Oryza sativa	56.57	5.00e-42	164.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence