iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014083

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100834717; BRADI_3g09420

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G09420	BRADI3G09420.1	BRADI3G09420.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.50e-09	37.6	107	149

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl   +dg  ++ lp CgH+fh +C+ +w       + +++CPlCr
   Q: 107  CAICLGVVRDGevVRRLPaCGHLFHVECVDMW------LYSHATCPLCR 149
           ******997775577888**************......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MSSPQPSHEV HSSSGGSSVA GIGSYRVCDT VVLFCLAFAC GLIVVTVAVC FKRAFAQREA 60
AASGAAAGGG RRRGGGRRGG LAPAELAAIP KAAYRRGGGG GGGWAQCAIC LGVVRDGEVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCCC CCCAGCCGTC CCACGAGGTC CACAGCAGCA GCGGCGGTTC CAGCGTCGCC 60
GGAATCGGCA GCTACAGGGT GTGCGACACG GTGGTGCTCT TCTGCCTCGC CTTCGCGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100834717

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051720	Leersia perrieri	68.18	8.00e-37	145.00
IUUC-Oin-079132	Oryza indica	63.69	2.00e-36	144.00
IUUC-Ome-081292	Oryza meridionalis	62.57	6.00e-38	149.00
IUUC-Oni-083051	Oryza nivara	63.69	2.00e-36	144.00
IUUC-Oru-084345	Oryza rufipogon	60.82	9.00e-36	141.00
IUUC-Osa-085570	Oryza sativa	60.82	9.00e-36	141.00
IUUC-Sit-110139	Setaria italica	67.94	1.00e-32	131.00
IUUC-Sbi-114014	Sorghum bicolor	64.39	3.00e-23	100.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence