iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-003111

Ensembl Protein ID

ERM93829

UniProt Accession

W1NEM8; W1NEM8_AMBTC

Genbank Protein ID

ERM93829.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KI397561

Gene Name

AMTR_s00138p00053700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00138p00053700	ERM93829	ERM93829

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.00e-36	125.3	20	93

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ++p+ f+CpIslelMrdPv++p+Gitydr+sIe+wl++ggktcPvt+qp++e +l+Pn++lrr+iq+wc +nss
   Q: 20   QIPSNFKCPISLELMRDPVIMPTGITYDRQSIERWLDEGGKTCPVTNQPVHEPELIPNHALRRMIQSWCVANSS 93
           69********************************************************************9986 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MFSRRSKLPE KLKPGIKSIQ IPSNFKCPIS LELMRDPVIM PTGITYDRQS IERWLDEGGK 60
TCPVTNQPVH EPELIPNHAL RRMIQSWCVA NSSNGVDRIP TPKIPISEAR VSEILSEISV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTTTCAC GGCGATCAAA GTTGCCAGAA AAGTTGAAAC CAGGGATCAA GAGCATTCAG 60
ATTCCGAGCA ATTTCAAGTG CCCCATCTCT CTTGAATTGA TGAGAGATCC CGTGATAATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

atr:18421723

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000169	Aegilops tauschii	38.71	1.00e-43	168.00
IUUC-Aly-006171	Arabidopsis lyrata	40.20	2.00e-79	288.00
IUUC-Ath-007695	Arabidopsis thaliana	40.14	3.00e-76	277.00
IUUC-Bdi-014295	Brachypodium distachyon	45.65	1.00e-89	322.00
IUUC-Bol-015846	Brassica oleracea	39.28	7.00e-80	289.00
IUUC-Bra-017285	Brassica rapa	38.89	2.00e-76	278.00
IUUC-Gma-042846	Glycine max	48.82	5.00e-95	340.00
IUUC-Hvu-047616	Hordeum vulgare	44.23	7.00e-93	333.00
IUUC-Lpe-050847	Leersia perrieri	43.38	4.00e-92	330.00
IUUC-Mtr-057926	Medicago truncatula	45.00	1.00e-83	302.00
IUUC-Mac-064511	Musa acuminata	43.96	2.00e-81	294.00
IUUC-Oba-075080	Oryza barthii	37.75	3.00e-67	247.00
IUUC-Obr-076534	Oryza brachyantha	41.61	1.00e-81	295.00
IUUC-Ogl-076969	Oryza glaberrima	44.86	4.00e-95	340.00
IUUC-Ogu-078872	Oryza glumaepatula	45.09	4.00e-98	350.00
IUUC-Oin-079622	Oryza indica	44.86	4.00e-95	340.00
IUUC-Olo-080664	Oryza longistaminata	41.95	2.00e-56	211.00
IUUC-Ome-081665	Oryza meridionalis	42.54	1.00e-83	301.00
IUUC-Oni-082871	Oryza nivara	44.86	4.00e-95	340.00
IUUC-Opu-084061	Oryza punctata	44.50	2.00e-93	335.00
IUUC-Oru-084561	Oryza rufipogon	44.39	6.00e-95	339.00
IUUC-Osa-086045	Oryza sativa	44.86	4.00e-95	340.00
IUUC-Olu-087884	Ostreococcus lucimarinus	60.29	9.00e-25	103.00
IUUC-Pop-099112	Populus trichocarpa	45.68	3.00e-97	347.00
IUUC-Ppe-101692	Prunus persica	48.71	6.00e-96	343.00
IUUC-Sit-109976	Setaria italica	46.45	2.00e-102	364.00
IUUC-Sly-110989	Solanum lycopersicum	43.45	3.00e-99	353.00
IUUC-Stu-112058	Solanum tuberosum	44.26	3.00e-103	367.00
IUUC-Sbi-114180	Sorghum bicolor	46.19	9.00e-93	332.00
IUUC-Tca-120967	Theobroma cacao	46.76	5.00e-94	336.00
IUUC-Tae-124576	Triticum aestivum	42.65	1.00e-79	289.00
IUUC-Tur-126397	Triticum urartu	45.85	6.00e-48	182.00
IUUC-Vvi-131485	Vitis vinifera	46.74	8.00e-101	359.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence