iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099112

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000351

Gene Name

POPTRDRAFT_810900; POPTR_0015s05380g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0015s05380	POPTR_0015s05380.1	POPTR_0015s05380.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.90e-31	107.1	23	94

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p++flCpIsl+lM+dPv+l+sGitydr+sIe wl+ g  tcP t+q l++ d++Pn++lrr+iq+w  +n+
   Q: 23   IPKHFLCPISLDLMKDPVTLSSGITYDRESIEAWLEGGSFTCPATNQVLRSLDQIPNHSLRRMIQDWGVANR 94
           89*****************************************************************88776 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MVFSWKRKRA AQEKLKKGEE LVIPKHFLCP ISLDLMKDPV TLSSGITYDR ESIEAWLEGG 60
SFTCPATNQV LRSLDQIPNH SLRRMIQDWG VANRNYGVER IPTPRVPVSG IQVSEVLLSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTTTTA GCTGGAAAAG GAAGAGAGCT GCTCAGGAAA AGCTGAAGAA AGGCGAGGAG 60
TTGGTGATAC CAAAACACTT TCTTTGCCCA ATATCTCTAG ATCTTATGAA AGATCCGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0015s05380g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003111	Amborella trichopoda	45.33	3.00e-96	345.00
IUUC-Bdi-014644	Brachypodium distachyon	44.47	7.00e-93	333.00
IUUC-Hvu-047616	Hordeum vulgare	46.45	3.00e-97	348.00
IUUC-Ogl-076969	Oryza glaberrima	45.88	4.00e-91	327.00
IUUC-Oin-079622	Oryza indica	45.88	4.00e-91	327.00
IUUC-Oni-082871	Oryza nivara	45.88	4.00e-91	327.00
IUUC-Opu-084061	Oryza punctata	45.73	1.00e-91	329.00
IUUC-Oru-084561	Oryza rufipogon	45.88	2.00e-91	328.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence