iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114668

UUCD1 version

UUC-SoB-00684

Ensembl Protein ID

Sb04g034270.1

UniProt Accession

A0A194YSM1; A0A194YSM1_SORBI

Genbank Protein ID

KXG31176.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G310400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g034270	Sb04g034270.1	Sb04g034270.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.40e-08	34.0	190	231

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+edf   +   + lpC+Hv+h dC+  w       + + +CP+Cr
   Q: 190  CPVCKEDFelgE-AARQLPCKHVYHSDCIVPW------LRLHNSCPVCR 231
           ********8843.499****************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSATTPAPAR HRTCRMYWCY QCGRALRIIS YPSTDVFCPR CFGRFLHEID PTPARPAFPP 60
PHFLPHPFHP QHQYDGHPRR WVIYGGEPTT TTTVPGRAFR QPATSQAPAT PPAPAPVRRR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCCTCCGAG AGCTACAGCT GCTCAGGACG CAACAAGCAC CAACAAACCA ACCCACCCGA 60
CGCAAGGAAC CGAACCAACC ACCGTCCCGC CGACGATGTC GGCGACGACG CCCGCGCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004365	Anolis carolinensis	50.59	3.00e-23	99.40
IUUC-Bdi-014175	Brachypodium distachyon	62.71	6.00e-85	306.00
IUUC-Cel-018216	Caenorhabditis elegans	42.86	1.00e-13	69.30
IUUC-Dse-031285	Dothistroma septosporum	44.74	2.00e-15	74.70
IUUC-Hvu-047508	Hordeum vulgare	70.62	2.00e-60	223.00
IUUC-Lpe-051117	Leersia perrieri	63.95	3.00e-82	297.00
IUUC-Mac-065088	Musa acuminata	55.19	6.00e-47	179.00
IUUC-Ogu-078527	Oryza glumaepatula	68.75	4.00e-95	340.00
IUUC-Oin-079098	Oryza indica	64.91	9.00e-85	305.00
IUUC-Ome-081151	Oryza meridionalis	69.69	4.00e-95	340.00
IUUC-Oni-082976	Oryza nivara	69.62	5.00e-55	206.00
IUUC-Opu-083601	Oryza punctata	67.75	6.00e-92	329.00
IUUC-Osa-085378	Oryza sativa	68.77	2.00e-100	358.00
IUUC-Olu-087587	Ostreococcus lucimarinus	47.92	2.00e-11	63.20
IUUC-Pma-094408	Petromyzon marinus	49.04	6.00e-27	113.00
IUUC-Sit-110208	Setaria italica	73.37	2.00e-109	387.00
IUUC-Sar-113319	Sorex araneus	57.81	6.00e-17	80.50
IUUC-Tgu-117105	Taeniopygia guttata	49.04	1.00e-25	107.00
IUUC-Tca-121535	Theobroma cacao	69.61	3.00e-40	158.00
IUUC-Tae-124758	Triticum aestivum	64.24	4.00e-85	307.00
IUUC-Tbe-127794	Tupaia belangeri	62.26	2.00e-17	81.60
IUUC-Zma-134795	Zea mays	75.40	1.00e-108	385.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence