iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058156

Ensembl Protein ID

KEH30892

UniProt Accession

A0A072UML1; A0A072UML1_MEDTR

Genbank Protein ID

KEH30892.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g485520

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g485520	KEH30892	KEH30892

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-32	112.6	273	345

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pe+flCpIslelMrdPv++++G+ty+rs+I++w++ g++tcP+t+q+l++ +l+Pn++lr+l+++wc e+++
   Q: 273  IPEDFLCPISLELMRDPVIVATGQTYERSYIQRWIDCGNTTCPKTQQKLQHLTLTPNYVLRSLVSQWCIEHNI 345
           8*******************************************************************99976 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAGEFAGDNT PELLCLIHDI TGMCVGGGGD SSSITADAMF RKDCTDLVRR ISLLTHLFEE 60
IRELNKTNDS ASSSSVTVSN SEDSWSSDLV LALQSAKRLL HEAKNFSSNS SSDGAAKKII 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATAGCATT AACATTAATG ATTAATTTAT TAGAGTGATT ACTCATTCAG CACTATCGTT 60
ACGTGTCAAA ACTCCATAAG TCTCATCAAA AACCTCATTA GACTCTCTCT GACTTCACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

mtr:MTR_4g485520

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000977	Aegilops tauschii	56.89	5.00e-165	573.00
IUUC-Aly-005733	Arabidopsis lyrata	62.25	0.00e+00	684.00
IUUC-Ath-007555	Arabidopsis thaliana	63.58	0.00e+00	693.00
IUUC-Bdi-014341	Brachypodium distachyon	54.30	5.00e-173	600.00
IUUC-Bol-015936	Brassica oleracea	62.34	0.00e+00	717.00
IUUC-Bra-016825	Brassica rapa	61.71	0.00e+00	721.00
IUUC-Gma-044210	Glycine max	84.83	0.00e+00	1073.00
IUUC-Lpe-051513	Leersia perrieri	54.23	1.00e-173	602.00
IUUC-Mac-065650	Musa acuminata	52.26	5.00e-161	560.00
IUUC-Oba-075045	Oryza barthii	53.75	1.00e-173	602.00
IUUC-Obr-076820	Oryza brachyantha	63.84	4.00e-157	546.00
IUUC-Ogl-077779	Oryza glaberrima	54.22	7.00e-177	613.00
IUUC-Ogu-078572	Oryza glumaepatula	54.38	2.00e-177	615.00
IUUC-Oin-079487	Oryza indica	54.06	3.00e-176	611.00
IUUC-Olo-080348	Oryza longistaminata	57.62	1.00e-170	592.00
IUUC-Ome-081282	Oryza meridionalis	54.65	6.00e-176	610.00
IUUC-Oni-083061	Oryza nivara	54.06	3.00e-176	611.00
IUUC-Opu-083297	Oryza punctata	55.03	2.00e-167	581.00
IUUC-Oru-084442	Oryza rufipogon	54.22	7.00e-177	613.00
IUUC-Osa-085919	Oryza sativa	54.22	7.00e-177	613.00
IUUC-Pop-099289	Populus trichocarpa	66.56	0.00e+00	786.00
IUUC-Ppe-101146	Prunus persica	66.77	0.00e+00	792.00
IUUC-Sit-110422	Setaria italica	52.06	5.00e-163	566.00
IUUC-Sly-111534	Solanum lycopersicum	63.72	0.00e+00	739.00
IUUC-Stu-112138	Solanum tuberosum	65.26	0.00e+00	762.00
IUUC-Sbi-114533	Sorghum bicolor	56.44	9.00e-167	579.00
IUUC-Ssc-116061	Sus scrofa	25.56	8.00e-12	66.20
IUUC-Tca-121496	Theobroma cacao	67.84	0.00e+00	827.00
IUUC-Tae-125340	Triticum aestivum	56.68	2.00e-163	568.00
IUUC-Tur-126634	Triticum urartu	55.60	1.00e-147	515.00
IUUC-Tme-127103	Tuber melanosporum	26.62	2.00e-17	83.60
IUUC-Ttr-128612	Tursiops truncatus	25.00	3.00e-11	64.30
IUUC-Vvi-131185	Vitis vinifera	70.71	0.00e+00	833.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence