iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oni-082548

Ensembl Protein ID

ONIVA03G00640.1

UniProt Accession

A0A0E0GFP9; A0A0E0GFP9_ORYNI

Protein Name

Protein HIRA

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ONIVA03G00640	ONIVA03G00640.1	ONIVA03G00640.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.30e-21	74.4	123	160
UBD/Beta-Prp	1.10e-42	147.4	11	281

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt++v +l++ +d  +l+sGs D+t+++W++  g ++
   Q: 123  GHTADVVDLNWsPDdSTLASGSLDNTVHIWSMANGICT 160
           8***********77799**************9988776 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkl...........lrslsgheaevtavkfspdgkilvtgseDrtikvw........... 79
           h+  +i ++++ p++  +atg+ d++i++w++++  +           l+++ +h ++v++v++ ++g +l++gs+D++i++            
   Q: 11   HEGLQIFSIDIQPGGIRFATGGGDQKIRIWSMKSVAKdndsddssqrlLATIRDHFGTVNCVRWAHHGRYLASGSDDQVIQIHerkagtgtsef 104
           56677888999***********************888**********************************************88888888888 PP
   S: 80   ......dlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl. 166
                 d+++ k v+tl+gh+++v++l++sp++++l+sGs d+t+++w + +g c   +l+gh+++v +v+++p g+ ++s s+D+tv +W+  
   Q: 105  gsgeppDVENWKVVMTLRGHTADVVDLNWSPDDSTLASGSLDNTVHIWSMANGICTA-VLRGHSSLVKGVTWDPIGSFIASQSDDKTVIIWRTs 197
           888888888************************************************.***********************************7 PP
   S: 167  .................................................ktgkllrtl..tgghtdsvyslsfdsng..kelvsg 198
                                                            ++g+   t+   g h+ +v  ++f++++  k+l sg
   Q: 198  dwslahrteghwskslgstffrrlawspcghfittthgfqkprhsapvlERGEWSATFdfLG-HNAPVVVVKFNHSMfrKHLSSG 281
           77777777777777766666666666666666666666666666666666666666665565.6666666666666655555555 PP

Organism

Oryza nivara

Functional Description
(View)

Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

Protein Sequence
(Fasta)

MITEKPSWIR HEGLQIFSID IQPGGIRFAT GGGDQKIRIW SMKSVAKDND SDDSSQRLLA 60
TIRDHFGTVN CVRWAHHGRY LASGSDDQVI QIHERKAGTG TSEFGSGEPP DVENWKVVMT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTACGG AGAAGCCGAG CTGGATTCGC CACGAGGGCC TGCAGATCTT CTCTATCGAC 60
ATCCAGCCGG GCGGCATCCG CTTCGCCACC GGCGGCGGCG ACCAGAAGGT GACTTAAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR031120--HIR1
IPR011494--Hira
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07569--Hira
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016569--P:covalent chromatin modification
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001039	Aegilops tauschii	83.48	0.00e+00	1672.00
IUUC-Aml-001723	Ailuropoda melanoleuca	41.93	2.00e-82	300.00
IUUC-Atr-003132	Amborella trichopoda	68.99	0.00e+00	1350.00
IUUC-Apl-003197	Anas platyrhynchos	37.04	1.00e-84	307.00
IUUC-Aca-004733	Anolis carolinensis	37.20	1.00e-88	320.00
IUUC-Aly-005446	Arabidopsis lyrata	66.80	0.00e+00	1232.00
IUUC-Ath-007627	Arabidopsis thaliana	64.29	0.00e+00	1224.00
IUUC-Ago-007766	Ashbya gossypii	31.18	6.00e-60	225.00
IUUC-Acl-008104	Aspergillus clavatus	32.06	1.00e-71	264.00
IUUC-Afl-008591	Aspergillus flavus	31.72	6.00e-71	262.00
IUUC-Afu-008781	Aspergillus fumigatus	32.34	7.00e-65	241.00
IUUC-Ani-009272	Aspergillus nidulans	31.63	8.00e-58	218.00
IUUC-Ang-009655	Aspergillus niger	34.66	2.00e-70	260.00
IUUC-Aor-010119	Aspergillus oryzae	31.53	3.00e-70	259.00
IUUC-Ate-010530	Aspergillus terreus	29.75	6.00e-56	212.00
IUUC-Bgr-012237	Blumeria graminis	31.78	1.00e-68	254.00
IUUC-Bta-013320	Bos taurus	36.13	1.00e-82	300.00
IUUC-Bci-013795	Botrytis cinerea	31.85	2.00e-72	267.00
IUUC-Bdi-014075	Brachypodium distachyon	86.85	0.00e+00	1726.00
IUUC-Bol-016440	Brassica oleracea	66.84	0.00e+00	1236.00
IUUC-Bra-016651	Brassica rapa	65.73	0.00e+00	1196.00
IUUC-Cel-018692	Caenorhabditis elegans	26.97	1.00e-43	171.00
IUUC-Cja-018987	Callithrix jacchus	35.67	4.00e-75	275.00
IUUC-Cfa-020132	Canis familiaris	41.49	2.00e-82	300.00
IUUC-Cpo-021484	Cavia porcellus	42.09	1.00e-86	313.00
IUUC-Cre-022846	Chlamydomonas reinhardtii	36.57	3.00e-72	266.00
IUUC-Csa-023081	Chlorocebus sabaeus	37.09	1.00e-87	317.00
IUUC-Cin-025182	Ciona intestinalis	33.39	7.00e-85	308.00
IUUC-Csv-026154	Ciona savignyi	37.89	1.00e-83	304.00
IUUC-Cgl-026655	Colletotrichum gloeosporioides	30.52	1.00e-66	248.00
IUUC-Cne-026891	Cryptococcus neoformans	39.11	1.00e-79	291.00
IUUC-Cme-027349	Cyanidioschyzon merolae	30.04	5.00e-54	206.00
IUUC-Dre-027655	Danio rerio	36.50	1.00e-85	310.00
IUUC-Dno-029557	Dasypus novemcinctus	36.67	9.00e-70	258.00
IUUC-Dor-030687	Dipodomys ordii	34.30	5.00e-65	242.00
IUUC-Dse-031334	Dothistroma septosporum	28.59	2.00e-86	313.00
IUUC-Dme-031746	Drosophila melanogaster	38.80	1.00e-84	307.00
IUUC-Ete-032384	Echinops telfairi	32.14	8.00e-63	235.00
IUUC-Eca-033430	Equus caballus	36.49	3.00e-83	303.00
IUUC-Fca-036121	Felis catus	42.05	6.00e-84	305.00
IUUC-Fal-036817	Ficedula albicollis	36.96	1.00e-83	304.00
IUUC-Fox-037906	Fusarium oxysporum	36.09	9.00e-74	270.00
IUUC-Fso-038409	Fusarium solani	34.94	6.00e-73	268.00
IUUC-Gmo-039151	Gadus morhua	34.77	1.00e-82	300.00
IUUC-Ggr-040016	Gaeumannomyces graminis	35.81	2.00e-71	264.00
IUUC-Gga-040936	Gallus gallus	37.35	8.00e-89	321.00
IUUC-Gac-041405	Gasterosteus aculeatus	35.31	1.00e-81	297.00
IUUC-Gma-044252	Glycine max	72.21	0.00e+00	1432.00
IUUC-Ggo-045430	Gorilla gorilla	37.09	7.00e-88	318.00
IUUC-Hsa-046442	Homo sapiens	37.09	6.00e-88	318.00
IUUC-Hvu-047587	Hordeum vulgare	87.88	0.00e+00	1629.00
IUUC-Itr-048910	Ictidomys tridecemlineatus	42.41	3.00e-64	237.00
IUUC-Kpa-049145	Komagataella pastoris	30.84	2.00e-56	213.00
IUUC-Lch-050474	Latimeria chalumnae	36.40	2.00e-84	306.00
IUUC-Lpe-051209	Leersia perrieri	93.29	0.00e+00	1833.00
IUUC-Loc-052119	Lepisosteus oculatus	36.31	5.00e-83	302.00
IUUC-Lma-053237	Leptosphaeria maculans	34.62	1.00e-69	257.00
IUUC-Laf-053718	Loxodonta africana	37.33	2.00e-87	316.00
IUUC-Mcc-055621	Macaca mulatta	36.13	2.00e-74	273.00
IUUC-Meu-055914	Macropus eugenii	37.65	2.00e-55	211.00
IUUC-Mor-057090	Magnaporthe oryzae	34.74	1.00e-69	258.00
IUUC-Mpo-057364	Magnaporthe poae	35.77	2.00e-71	264.00
IUUC-Mtr-057744	Medicago truncatula	71.31	0.00e+00	1396.00
IUUC-Mla-058914	Melampsora laricipopulina	26.97	9.00e-81	294.00
IUUC-Mga-060181	Meleagris gallopavo	37.38	1.00e-84	307.00
IUUC-Mvi-060432	Microbotryum violaceum	34.52	1.00e-59	224.00
IUUC-Mmr-060871	Microcebus murinus	37.13	6.00e-89	322.00
IUUC-Mdo-062301	Monodelphis domestica	36.96	5.00e-87	315.00
IUUC-Mmu-063888	Mus musculus	37.09	6.00e-88	318.00
IUUC-Mac-064768	Musa acuminata	71.77	0.00e+00	1417.00
IUUC-Mpu-066732	Mustela putorius furo	41.93	2.00e-82	300.00
IUUC-Mlu-067542	Myotis lucifugus	36.38	1.00e-83	304.00
IUUC-Nfi-068396	Neosartorya fischeri	31.93	1.00e-64	241.00
IUUC-Ncr-068842	Neurospora crassa	35.66	6.00e-72	265.00
IUUC-Nle-070156	Nomascus leucogenys	36.89	7.00e-88	318.00
IUUC-Opr-070808	Ochotona princeps	41.06	5.00e-53	202.00
IUUC-Ont-072105	Oreochromis niloticus	36.33	2.00e-84	306.00
IUUC-Ocu-074962	Oryctolagus cuniculus	36.69	3.00e-83	302.00
IUUC-Oba-075178	Oryza barthii	99.38	0.00e+00	1873.00
IUUC-Obr-076399	Oryza brachyantha	95.70	0.00e+00	1824.00
IUUC-Ogu-078797	Oryza glumaepatula	99.49	0.00e+00	1873.00
IUUC-Oin-080085	Oryza indica	99.79	0.00e+00	1790.00
IUUC-Olo-081048	Oryza longistaminata	98.15	0.00e+00	825.00
IUUC-Ome-081324	Oryza meridionalis	98.36	0.00e+00	1863.00
IUUC-Opu-084008	Oryza punctata	98.73	0.00e+00	920.00
IUUC-Oru-084339	Oryza rufipogon	99.49	0.00e+00	1870.00
IUUC-Osa-085782	Oryza sativa	99.49	0.00e+00	1870.00
IUUC-Ola-087302	Oryzias latipes	35.43	4.00e-80	292.00
IUUC-Olu-087611	Ostreococcus lucimarinus	34.12	2.00e-152	532.00
IUUC-Oga-087935	Otolemur garnettii	37.23	8.00e-84	305.00
IUUC-Oar-089229	Ovis aries	32.37	6.00e-66	245.00
IUUC-Ptr-090715	Pan troglodytes	37.09	8.00e-88	318.00
IUUC-Pan-092318	Papio anubis	36.67	9.00e-84	304.00
IUUC-Psi-094053	Pelodiscus sinensis	36.77	2.00e-84	307.00
IUUC-Pno-094985	Phaeosphaeria nodorum	33.26	1.00e-63	238.00
IUUC-Ppa-095499	Physcomitrella patens	49.71	0.00e+00	929.00
IUUC-Pfo-096857	Poecilia formosa	35.17	2.00e-79	290.00
IUUC-Pab-098047	Pongo abelii	37.09	8.00e-88	318.00
IUUC-Pop-099587	Populus trichocarpa	70.85	0.00e+00	1357.00
IUUC-Pca-100558	Procavia capensis	49.22	4.00e-49	189.00
IUUC-Ppe-101261	Prunus persica	71.38	0.00e+00	1404.00
IUUC-Pva-102683	Pteropus vampyrus	36.70	7.00e-85	308.00
IUUC-Pgr-103660	Puccinia graminis	36.22	8.00e-61	228.00
IUUC-Ptt-103900	Puccinia triticina	31.15	9.00e-61	228.00
IUUC-Pte-104209	Pyrenophora teres	35.06	3.00e-73	270.00
IUUC-Pyt-104802	Pyrenophora triticirepentis	35.06	1.00e-72	267.00
IUUC-Rno-105566	Rattus norvegicus	37.09	5.00e-88	318.00
IUUC-Sce-106291	Saccharomyces cerevisiae	30.53	5.00e-64	238.00
IUUC-Sha-107514	Sarcophilus harrisii	34.31	2.00e-71	263.00
IUUC-Sja-107833	Schizosaccharomyces japonicus	28.01	2.00e-86	313.00
IUUC-Spo-108162	Schizosaccharomyces pombe	34.54	1.00e-73	271.00
IUUC-Smo-109186	Selaginella moellendorffii	50.51	0.00e+00	907.00
IUUC-Sit-110730	Setaria italica	86.72	0.00e+00	1673.00
IUUC-Sly-111547	Solanum lycopersicum	69.66	0.00e+00	1345.00
IUUC-Stu-112705	Solanum tuberosum	69.87	0.00e+00	1347.00
IUUC-Sar-113222	Sorex araneus	34.32	8.00e-76	278.00
IUUC-Sbi-114272	Sorghum bicolor	84.73	0.00e+00	1648.00
IUUC-Sre-115061	Sporisorium reilianum	36.63	1.00e-68	254.00
IUUC-Ssc-116364	Sus scrofa	36.29	3.00e-83	303.00
IUUC-Tgu-116645	Taeniopygia guttata	36.40	2.00e-83	303.00
IUUC-Tru-117590	Takifugu rubripes	36.15	1.00e-88	320.00
IUUC-Tsy-119212	Tarsius syrichta	42.26	7.00e-71	261.00
IUUC-Tni-119915	Tetraodon nigroviridis	36.16	1.00e-87	317.00
IUUC-Tca-121765	Theobroma cacao	71.33	0.00e+00	1380.00
IUUC-Tre-121887	Trichoderma reesei	36.09	9.00e-66	244.00
IUUC-Tvi-122262	Trichoderma virens	35.86	2.00e-65	243.00
IUUC-Tae-123009	Triticum aestivum	85.35	0.00e+00	1120.00
IUUC-Tur-126483	Triticum urartu	86.65	0.00e+00	1696.00
IUUC-Tme-127202	Tuber melanosporum	28.54	1.00e-50	194.00
IUUC-Tbe-127350	Tupaia belangeri	33.33	2.00e-48	187.00
IUUC-Ttr-129077	Tursiops truncatus	33.53	9.00e-73	268.00
IUUC-Uma-129465	Ustilago maydis	36.82	5.00e-70	259.00
IUUC-Vda-129844	Verticillium dahliae	34.17	3.00e-69	256.00
IUUC-Vvi-131397	Vitis vinifera	73.47	0.00e+00	1419.00
IUUC-Xtr-132057	Xenopus tropicalis	36.61	1.00e-87	317.00
IUUC-Xma-134139	Xiphophorus maculatus	33.77	9.00e-68	251.00
IUUC-Yli-134424	Yarrowia lipolytica	36.02	1.00e-65	244.00
IUUC-Zma-135839	Zea mays	83.79	0.00e+00	1637.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence