iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cne-026835

Ensembl Protein ID

AAW46543

UniProt Accession

Q5K8L8; Q5K8L8_CRYNJ

Genbank Protein ID

AAW46543.1

Protein Name

WD-repeat protein, putative

Genbank Nucleotide ID

AE017352

Gene Name

CNL05200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CNL05200	AAW46543	AAW46543

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-38	128.1	155	199
UBD/Beta-Prp	3.30e-75	251.4	434	556

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf........sdtllvsGsdDgtikvWDlrtgvllks 38
           gH +++t+laf        + + lvs s+D  +kvWDl t++++++
   Q: 155  GHRAPITGLAFiphprgghP-GWLVSTSRDTYLKVWDLGTQHCVQT 199
           8***********99887533.77********************986 PP

UBD/Beta-Prp

   S: 89   tlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfd 189
            l gh ++++++s+s ++++++s+s   t+++w+ +t  c++   + + g   c ++ p ++ +v G++ + ++l+d++  +ll+t +  ht++v s+s++
   Q: 434  ELPGHRQDIRTISISSDDQVIASAS-SGTLKLWNARTTACIR---TMECGYALCSTFLPGDRHVVIGTKGGELMLYDVAASSLLKTYKA-HTGPVWSVSVR 529
           344*************999999999.89*************9...8888899999999999**************************98.*********** PP
   S: 190  sngkelvsgsldgtvklwdlq.....t 211
           ++g+ lvsgs d++vk+wd++     +
   Q: 530  PDGRGLVSGSADKDVKFWDFEmreegE 556
           *******************99766553 PP

Organism

Cryptococcus neoformans

Protein Sequence
(Fasta)

MVKSYMRHGP TQAFGIICSP TANSSYNGRL AYVPGWEDVL VWDTKRGEMV AMWHSTGLTS 60
PVTYLIPAPT PYTSTSTTPV TFAVSYQDGS IRLWSYDPST PDVEASETVT FNGHKKSVTT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGACATGG TCAAGTCATA TATGCGCCAC GGCCCTACTC AGGTAAAGTT GAACTGTAAC 60
CATTAGTATC AATCTTCTAA CCCCTCTTAG GCCTTCGGCA TCATCTGTTC ACCCACAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

cne:CNL05200

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	36.83	1.00e-116	412.00
IUUC-Aml-001245	Ailuropoda melanoleuca	45.89	3.00e-134	470.00
IUUC-Atr-002700	Amborella trichopoda	39.86	2.00e-113	402.00
IUUC-Apl-004164	Anas platyrhynchos	49.34	2.00e-107	380.00
IUUC-Aca-004765	Anolis carolinensis	42.57	7.00e-129	452.00
IUUC-Aly-006503	Arabidopsis lyrata	39.59	7.00e-118	416.00
IUUC-Ath-006848	Arabidopsis thaliana	40.03	2.00e-117	415.00
IUUC-Ago-007909	Ashbya gossypii	36.40	2.00e-163	567.00
IUUC-Acl-008238	Aspergillus clavatus	42.90	0.00e+00	733.00
IUUC-Afl-008544	Aspergillus flavus	42.53	0.00e+00	719.00
IUUC-Afu-008868	Aspergillus fumigatus	42.91	0.00e+00	728.00
IUUC-Ani-009367	Aspergillus nidulans	43.01	0.00e+00	717.00
IUUC-Ang-009732	Aspergillus niger	44.15	0.00e+00	758.00
IUUC-Aor-010140	Aspergillus oryzae	42.84	0.00e+00	727.00
IUUC-Ate-010572	Aspergillus terreus	41.54	0.00e+00	706.00
IUUC-Ame-010956	Astyanax mexicanus	46.81	3.00e-136	477.00
IUUC-Bgr-012296	Blumeria graminis	40.02	0.00e+00	677.00
IUUC-Bta-012716	Bos taurus	46.13	8.00e-138	482.00
IUUC-Bci-013699	Botrytis cinerea	40.69	0.00e+00	688.00
IUUC-Bdi-014525	Brachypodium distachyon	36.60	2.00e-123	435.00
IUUC-Bol-015117	Brassica oleracea	42.31	2.00e-120	424.00
IUUC-Bra-016869	Brassica rapa	35.10	7.00e-150	522.00
IUUC-Cel-018570	Caenorhabditis elegans	34.06	3.00e-69	254.00
IUUC-Cja-019425	Callithrix jacchus	46.40	8.00e-134	469.00
IUUC-Cfa-020787	Canis familiaris	46.11	4.00e-135	473.00
IUUC-Cpo-021729	Cavia porcellus	45.03	8.00e-140	488.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	43.47	3.00e-102	364.00
IUUC-Csa-024098	Chlorocebus sabaeus	46.23	2.00e-136	477.00
IUUC-Cho-024495	Choloepus hoffmanni	41.73	1.00e-104	372.00
IUUC-Cin-025245	Ciona intestinalis	44.15	7.00e-63	233.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	41.22	0.00e+00	687.00
IUUC-Cme-027162	Cyanidioschyzon merolae	27.27	1.00e-32	133.00
IUUC-Dre-027874	Danio rerio	37.10	2.00e-168	583.00
IUUC-Dno-028905	Dasypus novemcinctus	46.06	8.00e-136	476.00
IUUC-Dor-030383	Dipodomys ordii	44.18	9.00e-63	233.00
IUUC-Dse-031297	Dothistroma septosporum	38.50	0.00e+00	634.00
IUUC-Dme-031956	Drosophila melanogaster	36.59	2.00e-108	385.00
IUUC-Ete-032608	Echinops telfairi	44.47	4.00e-94	336.00
IUUC-Eca-034181	Equus caballus	46.06	6.00e-133	466.00
IUUC-Eeu-034495	Erinaceus europaeus	46.97	3.00e-129	454.00
IUUC-Fca-035994	Felis catus	46.83	2.00e-126	444.00
IUUC-Fal-036611	Ficedula albicollis	45.72	3.00e-138	483.00
IUUC-Fox-037807	Fusarium oxysporum	40.44	0.00e+00	677.00
IUUC-Fso-038090	Fusarium solani	41.00	0.00e+00	665.00
IUUC-Gmo-039018	Gadus morhua	31.93	3.00e-76	277.00
IUUC-Ggr-039748	Gaeumannomyces graminis	41.98	0.00e+00	694.00
IUUC-Gga-040707	Gallus gallus	45.21	4.00e-137	480.00
IUUC-Gac-042334	Gasterosteus aculeatus	46.20	4.00e-44	171.00
IUUC-Gma-043033	Glycine max	40.60	4.00e-116	410.00
IUUC-Ggo-045334	Gorilla gorilla	46.40	5.00e-136	476.00
IUUC-Hsa-046996	Homo sapiens	46.23	2.00e-135	474.00
IUUC-Hvu-047381	Hordeum vulgare	30.27	4.00e-69	253.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	45.03	1.00e-132	465.00
IUUC-Kpa-049185	Komagataella pastoris	35.47	4.00e-162	563.00
IUUC-Lch-050098	Latimeria chalumnae	51.75	1.00e-114	405.00
IUUC-Lpe-050710	Leersia perrieri	35.82	6.00e-139	486.00
IUUC-Loc-052745	Lepisosteus oculatus	42.57	1.00e-123	436.00
IUUC-Lma-053104	Leptosphaeria maculans	40.46	0.00e+00	684.00
IUUC-Laf-054395	Loxodonta africana	46.83	4.00e-137	480.00
IUUC-Mcc-055077	Macaca mulatta	46.23	1.00e-135	475.00
IUUC-Meu-056418	Macropus eugenii	43.30	3.00e-92	331.00
IUUC-Mor-057031	Magnaporthe oryzae	41.94	0.00e+00	636.00
IUUC-Mpo-057420	Magnaporthe poae	41.74	0.00e+00	682.00
IUUC-Mtr-057838	Medicago truncatula	40.99	1.00e-116	412.00
IUUC-Mla-058854	Melampsora laricipopulina	44.03	0.00e+00	749.00
IUUC-Mga-060120	Meleagris gallopavo	44.35	1.00e-135	475.00
IUUC-Mvi-060407	Microbotryum violaceum	50.72	0.00e+00	943.00
IUUC-Mmr-060635	Microcebus murinus	45.27	1.00e-132	465.00
IUUC-Mdo-063023	Monodelphis domestica	44.59	1.00e-134	472.00
IUUC-Mmu-064103	Mus musculus	45.38	7.00e-135	473.00
IUUC-Mac-065569	Musa acuminata	37.19	3.00e-155	540.00
IUUC-Mpu-066462	Mustela putorius furo	46.23	1.00e-135	475.00
IUUC-Mlu-067894	Myotis lucifugus	45.21	5.00e-132	463.00
IUUC-Nfi-068321	Neosartorya fischeri	42.55	0.00e+00	728.00
IUUC-Ncr-068661	Neurospora crassa	41.94	0.00e+00	689.00
IUUC-Nle-069409	Nomascus leucogenys	45.89	1.00e-134	472.00
IUUC-Opr-070445	Ochotona princeps	43.88	2.00e-129	454.00
IUUC-Ont-072339	Oreochromis niloticus	46.14	9.00e-133	466.00
IUUC-Oan-073688	Ornithorhynchus anatinus	44.60	2.00e-123	434.00
IUUC-Ocu-074227	Oryctolagus cuniculus	45.78	2.00e-134	471.00
IUUC-Oba-075635	Oryza barthii	35.37	2.00e-132	464.00
IUUC-Obr-076897	Oryza brachyantha	36.54	3.00e-143	500.00
IUUC-Ogl-077555	Oryza glaberrima	36.54	1.00e-126	445.00
IUUC-Ogu-078724	Oryza glumaepatula	36.68	1.00e-127	448.00
IUUC-Oin-080030	Oryza indica	36.68	4.00e-126	443.00
IUUC-Olo-080687	Oryza longistaminata	34.13	2.00e-116	411.00
IUUC-Ome-081867	Oryza meridionalis	36.68	8.00e-127	446.00
IUUC-Oni-082559	Oryza nivara	36.68	6.00e-126	443.00
IUUC-Opu-083332	Oryza punctata	38.13	1.00e-130	458.00
IUUC-Oru-084455	Oryza rufipogon	36.81	1.00e-126	445.00
IUUC-Osa-085793	Oryza sativa	36.81	1.00e-126	445.00
IUUC-Ola-087395	Oryzias latipes	44.18	4.00e-128	450.00
IUUC-Olu-087768	Ostreococcus lucimarinus	37.06	9.00e-137	479.00
IUUC-Oga-088574	Otolemur garnettii	45.22	1.00e-132	465.00
IUUC-Oar-089453	Ovis aries	46.23	2.00e-137	481.00
IUUC-Ptr-090694	Pan troglodytes	46.23	1.00e-135	475.00
IUUC-Pan-092420	Papio anubis	46.06	2.00e-135	474.00
IUUC-Psi-093683	Pelodiscus sinensis	44.86	2.00e-132	465.00
IUUC-Pma-094197	Petromyzon marinus	34.22	2.00e-28	116.00
IUUC-Pno-094783	Phaeosphaeria nodorum	46.40	6.00e-156	542.00
IUUC-Ppa-095208	Physcomitrella patens	34.24	8.00e-135	472.00
IUUC-Pfo-096299	Poecilia formosa	45.81	3.00e-139	487.00
IUUC-Pab-098706	Pongo abelii	46.23	4.00e-135	473.00
IUUC-Pop-099275	Populus trichocarpa	40.71	5.00e-109	387.00
IUUC-Pca-100796	Procavia capensis	38.80	7.00e-102	363.00
IUUC-Ppe-101861	Prunus persica	38.55	2.00e-113	402.00
IUUC-Pva-103241	Pteropus vampyrus	42.98	9.00e-128	449.00
IUUC-Pgr-103432	Puccinia graminis	44.68	0.00e+00	743.00
IUUC-Ptt-103742	Puccinia triticina	40.96	0.00e+00	677.00
IUUC-Pte-104069	Pyrenophora teres	40.38	0.00e+00	646.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	40.34	0.00e+00	671.00
IUUC-Rno-105219	Rattus norvegicus	44.69	1.00e-126	445.00
IUUC-Sce-106271	Saccharomyces cerevisiae	37.54	1.00e-170	591.00
IUUC-Sha-107550	Sarcophilus harrisii	45.30	2.00e-136	478.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	38.05	4.00e-176	610.00
IUUC-Spo-108239	Schizosaccharomyces pombe	38.64	1.00e-177	615.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	41.08	0.00e+00	706.00
IUUC-Smo-109477	Selaginella moellendorffii	39.52	4.00e-113	400.00
IUUC-Sit-110000	Setaria italica	42.83	1.00e-107	382.00
IUUC-Sly-111595	Solanum lycopersicum	44.94	4.00e-122	430.00
IUUC-Stu-112516	Solanum tuberosum	45.61	2.00e-121	428.00
IUUC-Sar-113195	Sorex araneus	45.41	2.00e-122	431.00
IUUC-Sbi-114465	Sorghum bicolor	40.85	1.00e-114	405.00
IUUC-Sre-115006	Sporisorium reilianum	43.67	0.00e+00	791.00
IUUC-Ssc-115929	Sus scrofa	45.64	8.00e-133	466.00
IUUC-Tgu-117282	Taeniopygia guttata	44.52	8.00e-133	466.00
IUUC-Tru-118406	Takifugu rubripes	46.73	2.00e-136	478.00
IUUC-Tsy-119170	Tarsius syrichta	45.03	3.00e-129	454.00
IUUC-Tni-119721	Tetraodon nigroviridis	45.44	5.00e-131	460.00
IUUC-Tca-121761	Theobroma cacao	36.59	7.00e-153	532.00
IUUC-Tre-121908	Trichoderma reesei	41.50	0.00e+00	667.00
IUUC-Tvi-122547	Trichoderma virens	41.09	0.00e+00	665.00
IUUC-Tae-123224	Triticum aestivum	36.32	3.00e-126	444.00
IUUC-Tur-126811	Triticum urartu	35.80	4.00e-131	460.00
IUUC-Tme-126987	Tuber melanosporum	44.39	0.00e+00	738.00
IUUC-Tbe-127315	Tupaia belangeri	48.15	5.00e-115	407.00
IUUC-Ttr-129165	Tursiops truncatus	47.16	2.00e-68	252.00
IUUC-Uma-129651	Ustilago maydis	44.61	0.00e+00	791.00
IUUC-Vda-129973	Verticillium dahliae	41.37	0.00e+00	659.00
IUUC-Vpa-130163	Vicugna pacos	41.14	3.00e-51	195.00
IUUC-Vvi-131402	Vitis vinifera	42.14	1.00e-120	425.00
IUUC-Xtr-132296	Xenopus tropicalis	45.96	5.00e-139	486.00
IUUC-Xma-133028	Xiphophorus maculatus	45.39	3.00e-138	484.00
IUUC-Yli-134484	Yarrowia lipolytica	46.66	3.00e-149	520.00
IUUC-Zma-135938	Zea mays	40.44	1.00e-111	395.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence