iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tae-125398

Ensembl Protein ID

TRIAE_CS42_4AS_TGACv1_306357_AA1006980.2

UniProt Accession

W5DVU0; W5DVU0_WHEAT

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIAE_CS42_4AS_TGACv1_306357_AA1006980	TRIAE_CS42_4AS_TGACv1_306357_AA1006980.1	TRIAE_CS42_4AS_TGACv1_306357_AA1006980.1
TRIAE_CS42_4AS_TGACv1_306357_AA1006980	TRIAE_CS42_4AS_TGACv1_306357_AA1006980.2	TRIAE_CS42_4AS_TGACv1_306357_AA1006980.2
TRIAE_CS42_4AS_TGACv1_306357_AA1006980	TRIAE_CS42_4AS_TGACv1_306357_AA1006980.5	TRIAE_CS42_4AS_TGACv1_306357_AA1006980.5
TRIAE_CS42_4AS_TGACv1_306357_AA1006980	TRIAE_CS42_4AS_TGACv1_306357_AA1006980.9	TRIAE_CS42_4AS_TGACv1_306357_AA1006980.9

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-21	78.1	456	492
UBD/Beta-Prp	4.80e-49	169.8	411	674

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtgv 34
           H ++v+++af  ++  l +++++dD+tikvW+ ++g+
   Q: 456  HVGGVNDIAFahPNkQLcIITCGDDKTIKVWEATSGT 492
           99*********97653359*************98885 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl...sgheaevtavkfspdgk..ilvtgse 72
           ++  ++ + +spd++l+ +++ ++ +++++++ g+ +r+      h ++v+++ f +  k   ++t+++
   Q: 411  PTVSVNRIIWSPDGTLFGVAYSRHIVQIYSYHGGDDIRQHleiDAHVGGVNDIAFAHPNKqlCIITCGD 479
           5556777889************************99665323389**********99888899****** PP
   S: 73   Drtikvwdlstgkcvhtlkghedsvlslsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgv 139
           D+tikvw+  +g+   t++ghe+ v+s+  +   + +++ s+  d  i+ w  ++     + +++  ++
   Q: 480  DKTIKVWEATSGTKQFTFEGHEAPVYSVCPHYkeNIQFIFSTALDGKIKAWLYDNLGSRVDYDAP-GHW 547
           ***************************855544388***************99998777756555.559 PP
   S: 140  vncvvvhpdgnllvsG..slDrtvrl..Wdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtv 204
            ++++++ dg+ l+s+  s+D+   l  W+ + g + rt +g  ++s   ++fd ++++++++++   +
   Q: 548  CTTMAYSADGSRLFSCgtSKDGESHLveWNESEGAVKRTYQGFRKRSMGVVQFDTTRNRFLAAGDEFVI 616
           9999999*9*999998334566544333999************************************** PP
   S: 205  klwdlqtgecvrtlnghtdnvks..vrfspnderlvsgssDgsiriW.dlrsgdllkt 259
           k+wd+ +++ + t ++    + s  +rf +++++l++ + D+ i++  + +   ll+t
   Q: 617  KIWDMDNTSLLTTIEADGGLPASprIRFNKEGTLLAVSTVDNGIKVLaNADGVRLLRT 674
           ****************998777533788899999999999***999545555555555 PP

Organism

Triticum aestivum

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFYFNMKY FEDEVINGNW DEVERYLGGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKHDR SKAVEILVKD LKVFASFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCAGTGGCA AACACGAGAG TTTCCTATAA ATAGGACCGC GAGGTGGTTG CCCCTCCCTG 60
CCCTAGCTAG CCCCCAACAA CCCATTTCCT CCCCCCACAG CTCTTCTCCG GCCCCTCCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR027728--Topless_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014914	Brachypodium distachyon	94.98	0.00e+00	2117.00
IUUC-Hvu-047688	Hordeum vulgare	98.32	0.00e+00	2080.00
IUUC-Lpe-051514	Leersia perrieri	90.70	0.00e+00	1988.00
IUUC-Oba-075912	Oryza barthii	93.57	0.00e+00	2061.00
IUUC-Ogl-077334	Oryza glaberrima	93.66	0.00e+00	2090.00
IUUC-Ogu-078494	Oryza glumaepatula	93.66	0.00e+00	2090.00
IUUC-Oin-079720	Oryza indica	92.19	0.00e+00	2080.00
IUUC-Ome-081778	Oryza meridionalis	93.57	0.00e+00	2092.00
IUUC-Oni-082412	Oryza nivara	93.57	0.00e+00	2060.00
IUUC-Oru-084328	Oryza rufipogon	93.54	0.00e+00	2078.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence