iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ncr-068711

Ensembl Protein ID

ESA44056

UniProt Accession

V5IRK9; V5IRK9_NEUCR

Genbank Protein ID

ESA44056.1

Protein Name

Pre-mRNA splicing factor

Genbank Nucleotide ID

CM002236

Gene Name

NCU11251

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
NCU11251	ESA44056	ESA44056

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-36	121.6	238	287
UBD/Beta-Prp	3.70e-55	186.2	199	432

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf............sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt++v++l++            +d   l+sG+  g+i++W+l ++++l+
   Q: 238  GHTNKVSGLCWmpgatlpernvsPDtVNLASGGAEGQIHLWSLNQDTPLR 287
           8***********88888888877665559**************9999887 PP

UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk...........ilvtgseDrtikvwdlstgkcvhtlkghedsvlsl 100
             i+   +spd++++atg + g +k+ ++ t    ++l gh+++v+ +++ p +             l++g+  + i++w+l++ ++++tl+gh+++v+ +
   Q: 199  RHISMTRISPDGNMVATGNWGGQVKLIEIPTLEPRKTLRGHTNKVSGLCWMPGATlpernvspdtvNLASGGAEGQIHLWSLNQDTPLRTLSGHSQRVCRV 299
           45666678***********************999**********99999999888888888888889********************************** PP
   S: 101  sfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl...tgghtdsvyslsfdsngkelvsg 198
           +f+psg++l+s+s+d   r+wd+etg++l  +++gh++ v  v++++dg+ll+s++lD++ r+Wdl+tg+    l   + gh +++y l++ s+g +++++
   Q: 300  EFHPSGKYLASASEDTSWRMWDVETGTELL-LQEGHSRGVYAVSYNSDGSLLASAGLDSIGRIWDLRTGRTAMILdghQDGHIKPIYGLDWGSDGYRVLTA 399
           ******************************.********************************************999888******************** PP
   S: 199  sldgtvklwdlqtgecvrtlnghtdnvksvrfs 231
           s dg +k wd+++ e +    +ht+ v +vr +
   Q: 400  SADGWIKCWDVRKVERIGGIGAHTSAVADVRWF 432
           ***************************999976 PP

Organism

Neurospora crassa

Protein Sequence
(Fasta)

MHPARRAYVE EAEPEQDRGG MDLDSVPLDR DYDIPGAGAG IAPEKASVLL SQFERKRLAA 60
SIAVPTDDGR VRAKLREMGE PVTLFGEGPA DRRDRLRELM TQQAEKGGQE SADVEMRDAE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCATCACCT GCTATTTCAC GACAGCAAGC AAAACATCGA GCCCTCACAT CAAACGGTCC 60
TTTAGCAACC ACAAGCCGGA CTCGAATCAC CTGGCTTTAC TCGCGTTCAA GTGTCCAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0046540--C:U4/U6 x U5 tri-snRNP complex
GO:0030621--F:U4 snRNA binding
GO:0017070--F:U6 snRNA binding
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000498	Aegilops tauschii	38.88	2.00e-77	281.00
IUUC-Aml-001737	Ailuropoda melanoleuca	37.71	1.00e-93	335.00
IUUC-Atr-002828	Amborella trichopoda	38.17	7.00e-85	306.00
IUUC-Apl-003723	Anas platyrhynchos	37.92	3.00e-95	340.00
IUUC-Aca-004972	Anolis carolinensis	38.14	2.00e-92	330.00
IUUC-Aly-006531	Arabidopsis lyrata	36.42	2.00e-69	254.00
IUUC-Ath-007367	Arabidopsis thaliana	36.42	6.00e-83	299.00
IUUC-Ago-007893	Ashbya gossypii	37.68	3.00e-76	276.00
IUUC-Acl-008236	Aspergillus clavatus	60.81	9.00e-175	604.00
IUUC-Afl-008522	Aspergillus flavus	62.38	4.00e-179	619.00
IUUC-Afu-008904	Aspergillus fumigatus	63.10	0.00e+00	625.00
IUUC-Ani-009198	Aspergillus nidulans	62.79	0.00e+00	632.00
IUUC-Ang-009662	Aspergillus niger	61.04	1.00e-175	607.00
IUUC-Aor-009881	Aspergillus oryzae	60.71	6.00e-177	611.00
IUUC-Ate-010333	Aspergillus terreus	60.30	6.00e-166	575.00
IUUC-Ame-011697	Astyanax mexicanus	37.50	4.00e-94	336.00
IUUC-Bgr-012254	Blumeria graminis	64.68	0.00e+00	683.00
IUUC-Bta-012615	Bos taurus	37.71	6.00e-94	336.00
IUUC-Bci-013720	Botrytis cinerea	67.50	0.00e+00	703.00
IUUC-Bdi-014302	Brachypodium distachyon	38.27	7.00e-88	315.00
IUUC-Bol-015594	Brassica oleracea	37.50	3.00e-72	264.00
IUUC-Bra-017465	Brassica rapa	37.93	2.00e-73	268.00
IUUC-Cel-018632	Caenorhabditis elegans	35.11	1.00e-71	262.00
IUUC-Cja-019747	Callithrix jacchus	37.71	6.00e-94	336.00
IUUC-Cfa-020288	Canis familiaris	37.71	1.00e-93	335.00
IUUC-Cpo-021440	Cavia porcellus	37.29	4.00e-92	330.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	35.84	4.00e-58	216.00
IUUC-Csa-023139	Chlorocebus sabaeus	36.87	1.00e-69	254.00
IUUC-Cho-024481	Choloepus hoffmanni	37.08	4.00e-88	316.00
IUUC-Cin-025106	Ciona intestinalis	37.31	1.00e-86	311.00
IUUC-Csv-026087	Ciona savignyi	36.46	5.00e-84	303.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	71.48	0.00e+00	763.00
IUUC-Cne-026793	Cryptococcus neoformans	43.57	6.00e-115	405.00
IUUC-Dre-028723	Danio rerio	37.47	1.00e-91	328.00
IUUC-Dno-029299	Dasypus novemcinctus	37.50	3.00e-93	333.00
IUUC-Dse-031562	Dothistroma septosporum	55.87	1.00e-159	554.00
IUUC-Dme-031783	Drosophila melanogaster	36.32	2.00e-78	284.00
IUUC-Ete-032669	Echinops telfairi	37.50	6.00e-94	336.00
IUUC-Eca-033566	Equus caballus	37.71	1.00e-93	335.00
IUUC-Eeu-034524	Erinaceus europaeus	42.26	5.00e-55	206.00
IUUC-Fca-036215	Felis catus	37.71	1.00e-93	335.00
IUUC-Fal-037018	Ficedula albicollis	39.95	6.00e-83	299.00
IUUC-Fox-037936	Fusarium oxysporum	77.07	0.00e+00	800.00
IUUC-Fso-038366	Fusarium solani	77.63	0.00e+00	834.00
IUUC-Gmo-038966	Gadus morhua	32.90	8.00e-55	205.00
IUUC-Ggr-039942	Gaeumannomyces graminis	76.29	0.00e+00	783.00
IUUC-Gga-040797	Gallus gallus	37.92	2.00e-95	341.00
IUUC-Gac-042598	Gasterosteus aculeatus	36.84	4.00e-79	286.00
IUUC-Gma-044220	Glycine max	37.27	1.00e-77	281.00
IUUC-Ggo-044682	Gorilla gorilla	37.92	1.00e-94	338.00
IUUC-Hsa-045804	Homo sapiens	37.92	5.00e-95	339.00
IUUC-Hvu-047567	Hordeum vulgare	39.39	7.00e-81	292.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	37.92	1.00e-94	338.00
IUUC-Kpa-049369	Komagataella pastoris	35.68	1.00e-69	254.00
IUUC-Lch-050074	Latimeria chalumnae	35.44	2.00e-82	298.00
IUUC-Lpe-051333	Leersia perrieri	38.95	2.00e-81	294.00
IUUC-Loc-052164	Lepisosteus oculatus	37.08	7.00e-94	335.00
IUUC-Lma-053088	Leptosphaeria maculans	57.71	2.00e-173	600.00
IUUC-Laf-053460	Loxodonta africana	37.71	7.00e-94	335.00
IUUC-Mcc-055859	Macaca mulatta	37.71	1.00e-93	335.00
IUUC-Meu-056134	Macropus eugenii	37.71	3.00e-94	337.00
IUUC-Mor-057251	Magnaporthe oryzae	71.73	0.00e+00	729.00
IUUC-Mpo-057375	Magnaporthe poae	85.43	1.00e-130	457.00
IUUC-Mtr-058546	Medicago truncatula	34.96	6.00e-74	269.00
IUUC-Mla-059145	Melampsora laricipopulina	46.81	7.00e-110	389.00
IUUC-Mga-059855	Meleagris gallopavo	37.92	2.00e-95	341.00
IUUC-Mvi-060372	Microbotryum violaceum	40.50	2.00e-83	301.00
IUUC-Mmr-060826	Microcebus murinus	38.35	2.00e-94	337.00
IUUC-Mdo-062748	Monodelphis domestica	37.50	4.00e-94	337.00
IUUC-Mmu-063351	Mus musculus	37.71	2.00e-93	334.00
IUUC-Mac-064846	Musa acuminata	37.80	5.00e-77	279.00
IUUC-Mpu-066006	Mustela putorius furo	37.71	1.00e-93	335.00
IUUC-Mlu-067398	Myotis lucifugus	37.92	9.00e-94	335.00
IUUC-Nfi-068399	Neosartorya fischeri	62.73	0.00e+00	652.00
IUUC-Nle-069982	Nomascus leucogenys	37.71	6.00e-94	336.00
IUUC-Opr-070596	Ochotona princeps	37.71	1.00e-93	335.00
IUUC-Ont-072374	Oreochromis niloticus	38.55	7.00e-87	312.00
IUUC-Oan-073166	Ornithorhynchus anatinus	36.60	9.00e-76	275.00
IUUC-Ocu-074371	Oryctolagus cuniculus	37.71	1.00e-93	335.00
IUUC-Oba-075083	Oryza barthii	38.59	1.00e-82	298.00
IUUC-Obr-076405	Oryza brachyantha	39.65	6.00e-82	296.00
IUUC-Ogl-077683	Oryza glaberrima	38.59	2.00e-82	297.00
IUUC-Ogu-078486	Oryza glumaepatula	38.51	7.00e-82	296.00
IUUC-Oin-079679	Oryza indica	38.59	3.00e-86	311.00
IUUC-Olo-080243	Oryza longistaminata	37.62	3.00e-69	253.00
IUUC-Ome-081230	Oryza meridionalis	38.51	3.00e-86	310.00
IUUC-Oni-082961	Oryza nivara	38.51	4.00e-86	310.00
IUUC-Opu-083189	Oryza punctata	38.08	4.00e-82	296.00
IUUC-Oru-084353	Oryza rufipogon	39.17	5.00e-85	306.00
IUUC-Osa-085458	Oryza sativa	38.51	3.00e-86	310.00
IUUC-Ola-086940	Oryzias latipes	38.08	1.00e-89	321.00
IUUC-Olu-087580	Ostreococcus lucimarinus	33.27	1.00e-54	205.00
IUUC-Oga-088703	Otolemur garnettii	36.23	3.00e-86	310.00
IUUC-Oar-089829	Ovis aries	37.71	1.00e-93	335.00
IUUC-Ptr-090838	Pan troglodytes	37.92	5.00e-95	339.00
IUUC-Pan-092261	Papio anubis	37.63	4.00e-92	330.00
IUUC-Psi-093020	Pelodiscus sinensis	37.08	1.00e-94	338.00
IUUC-Pno-094858	Phaeosphaeria nodorum	55.62	4.00e-158	549.00
IUUC-Ppa-095531	Physcomitrella patens	37.65	2.00e-86	311.00
IUUC-Pfo-096812	Poecilia formosa	34.51	6.00e-69	253.00
IUUC-Pab-097805	Pongo abelii	34.33	7.00e-70	256.00
IUUC-Pop-100051	Populus trichocarpa	34.34	4.00e-74	270.00
IUUC-Pca-100152	Procavia capensis	37.71	1.00e-93	335.00
IUUC-Ppe-101244	Prunus persica	37.77	2.00e-77	281.00
IUUC-Pva-102529	Pteropus vampyrus	36.02	2.00e-86	311.00
IUUC-Pgr-103550	Puccinia graminis	42.07	3.00e-112	396.00
IUUC-Ptt-103951	Puccinia triticina	36.84	5.00e-94	336.00
IUUC-Pte-104151	Pyrenophora teres	57.66	5.00e-167	578.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	57.28	3.00e-168	582.00
IUUC-Rno-105747	Rattus norvegicus	37.71	3.00e-93	333.00
IUUC-Sce-106418	Saccharomyces cerevisiae	32.93	3.00e-72	263.00
IUUC-Sha-107334	Sarcophilus harrisii	37.71	2.00e-94	337.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	39.75	2.00e-85	307.00
IUUC-Spo-108189	Schizosaccharomyces pombe	41.95	3.00e-93	333.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	67.75	0.00e+00	718.00
IUUC-Smo-109578	Selaginella moellendorffii	35.61	7.00e-85	306.00
IUUC-Sit-110102	Setaria italica	38.24	9.00e-84	302.00
IUUC-Sly-111668	Solanum lycopersicum	36.08	1.00e-76	278.00
IUUC-Stu-111928	Solanum tuberosum	36.08	1.00e-76	278.00
IUUC-Sar-113266	Sorex araneus	31.36	1.00e-69	255.00
IUUC-Sbi-114134	Sorghum bicolor	38.24	3.00e-83	300.00
IUUC-Sre-115114	Sporisorium reilianum	45.11	3.00e-109	387.00
IUUC-Ssc-115443	Sus scrofa	37.71	1.00e-93	335.00
IUUC-Tgu-117157	Taeniopygia guttata	37.50	4.00e-94	336.00
IUUC-Tru-118587	Takifugu rubripes	38.29	2.00e-90	324.00
IUUC-Tsy-119157	Tarsius syrichta	37.31	1.00e-75	275.00
IUUC-Tni-120427	Tetraodon nigroviridis	38.55	3.00e-92	330.00
IUUC-Tca-121368	Theobroma cacao	34.87	2.00e-79	288.00
IUUC-Tre-122074	Trichoderma reesei	75.33	0.00e+00	803.00
IUUC-Tvi-122349	Trichoderma virens	73.61	0.00e+00	793.00
IUUC-Tae-124256	Triticum aestivum	38.66	3.00e-79	287.00
IUUC-Tur-126532	Triticum urartu	41.09	2.00e-77	281.00
IUUC-Tme-126951	Tuber melanosporum	55.98	9.00e-162	561.00
IUUC-Tbe-128136	Tupaia belangeri	35.17	2.00e-81	294.00
IUUC-Ttr-129169	Tursiops truncatus	39.66	5.00e-58	216.00
IUUC-Uma-129399	Ustilago maydis	43.13	2.00e-104	370.00
IUUC-Vda-129842	Verticillium dahliae	75.72	0.00e+00	778.00
IUUC-Vpa-130440	Vicugna pacos	37.92	3.00e-94	337.00
IUUC-Vvi-131075	Vitis vinifera	37.02	8.00e-79	286.00
IUUC-Xma-133002	Xiphophorus maculatus	36.10	8.00e-66	242.00
IUUC-Yli-134569	Yarrowia lipolytica	36.27	3.00e-81	293.00
IUUC-Zma-135799	Zea mays	36.56	3.00e-79	287.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence