iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042857

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000853

Gene Name

GLYMA_20G087900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA20G21940	GLYMA20G21940.1	GLYMA20G21940.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.80e-06	28.6	862	902

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iC+e+++d p+++pC H f+++Cl  +w      +s   +CP+Cr
   Q: 862  CSICMESPED-PVFTPCAHKFCRECLfSCW-----GTSVGGKCPICR 902
           **********.888***********99***.....5666667****8 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSMAEEEPSI TSPPARTLHK FLSRSGKTVI AAQPLAVVRA TTSTGGARVL AAPPNSNDDP 60
TPPQEEEGEG ETGFDASHHH ERILLQRELT VSFDEFLEVT NTKVATEEEA LKSVMAPLEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTATGG CGGAAGAAGA ACCTTCCATA ACATCGCCAC CGGCAAGAAC GTTACACAAG 60
TTCCTCTCCC GCAGCGGCAA GACCGTCATC GCCGCGCAAC CTCTGGCGGT GGTTCGCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0016818--F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000167	Aegilops tauschii	55.84	0.00e+00	1011.00
IUUC-Atr-003058	Amborella trichopoda	56.73	0.00e+00	1028.00
IUUC-Aly-005600	Arabidopsis lyrata	61.15	0.00e+00	1139.00
IUUC-Ath-007079	Arabidopsis thaliana	60.85	0.00e+00	1132.00
IUUC-Bdi-014496	Brachypodium distachyon	55.29	0.00e+00	998.00
IUUC-Bol-015995	Brassica oleracea	60.42	0.00e+00	1149.00
IUUC-Bra-017004	Brassica rapa	59.35	0.00e+00	1088.00
IUUC-Hvu-047747	Hordeum vulgare	55.89	0.00e+00	1007.00
IUUC-Lpe-051123	Leersia perrieri	56.90	0.00e+00	1028.00
IUUC-Mtr-058194	Medicago truncatula	75.76	0.00e+00	1431.00
IUUC-Mac-064548	Musa acuminata	52.61	0.00e+00	948.00
IUUC-Oba-075316	Oryza barthii	54.89	0.00e+00	999.00
IUUC-Obr-076834	Oryza brachyantha	56.99	0.00e+00	1035.00
IUUC-Ogl-077508	Oryza glaberrima	56.52	0.00e+00	1016.00
IUUC-Ogu-078083	Oryza glumaepatula	54.89	0.00e+00	1019.00
IUUC-Oin-079893	Oryza indica	56.73	0.00e+00	1037.00
IUUC-Olo-080615	Oryza longistaminata	57.16	0.00e+00	1041.00
IUUC-Oni-082773	Oryza nivara	55.20	0.00e+00	1023.00
IUUC-Opu-083675	Oryza punctata	57.05	0.00e+00	1043.00
IUUC-Oru-084543	Oryza rufipogon	55.09	0.00e+00	1018.00
IUUC-Pop-099537	Populus trichocarpa	61.65	0.00e+00	1172.00
IUUC-Ppe-102107	Prunus persica	63.35	0.00e+00	1214.00
IUUC-Sit-110795	Setaria italica	56.10	0.00e+00	954.00
IUUC-Sly-111031	Solanum lycopersicum	61.35	0.00e+00	1175.00
IUUC-Stu-112600	Solanum tuberosum	61.35	0.00e+00	1172.00
IUUC-Sbi-114616	Sorghum bicolor	55.04	0.00e+00	982.00
IUUC-Tca-121146	Theobroma cacao	59.59	0.00e+00	1192.00
IUUC-Tae-123674	Triticum aestivum	56.09	0.00e+00	1012.00
IUUC-Tur-125999	Triticum urartu	53.09	0.00e+00	949.00
IUUC-Vvi-131508	Vitis vinifera	63.42	0.00e+00	1193.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence