iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002561

Ensembl Protein ID

ERN08807

UniProt Accession

W1PFP8; W1PFP8_AMBTC

Genbank Protein ID

ERN08807.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KI393256

Gene Name

AMTR_s00017p00257160

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00017p00257160	ERN08807	ERN08807

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.80e-31	107.9	3	70

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawc 69
           +p+ f+CpIsl+l +dPv+l++G+tydr+sIekwl+ g++tcPvt+q+l++ +++Pn+tlr+li++w+
   Q: 3    IPHLFRCPISLDLLTDPVILSTGQTYDRASIEKWLSYGNQTCPVTMQKLHDFSMIPNHTLRQLIDRWL 70
           899****************************************************************7 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MSIPHLFRCP ISLDLLTDPV ILSTGQTYDR ASIEKWLSYG NQTCPVTMQK LHDFSMIPNH 60
TLRQLIDRWL LCELKNPGSI ARDSSLESLK QILESQQPPT LELMQKIRSL SAESDENRVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTATCC CCCATCTGTT CAGGTGCCCA ATTAGTCTTG ACCTTCTCAC TGATCCAGTC 60
ATCTTAAGCA CAGGCCAAAC CTATGACAGA GCAAGCATTG AGAAATGGCT CTCTTATGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

atr:18436943

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014442	Brachypodium distachyon	39.17	2.00e-38	152.00
IUUC-Gma-043244	Glycine max	40.67	5.00e-66	243.00
IUUC-Lpe-051453	Leersia perrieri	41.30	2.00e-38	151.00
IUUC-Mtr-058668	Medicago truncatula	42.31	3.00e-66	244.00
IUUC-Mac-065385	Musa acuminata	43.63	1.00e-71	262.00
IUUC-Oba-075982	Oryza barthii	70.42	2.00e-27	114.00
IUUC-Ogl-077204	Oryza glaberrima	43.15	5.00e-32	130.00
IUUC-Ogu-078726	Oryza glumaepatula	43.15	5.00e-32	130.00
IUUC-Oin-079338	Oryza indica	42.56	2.00e-32	132.00
IUUC-Ome-081303	Oryza meridionalis	40.44	6.00e-36	143.00
IUUC-Oni-082692	Oryza nivara	42.56	3.00e-32	131.00
IUUC-Opu-083613	Oryza punctata	37.80	4.00e-40	157.00
IUUC-Oru-084341	Oryza rufipogon	42.56	6.00e-32	130.00
IUUC-Osa-086241	Oryza sativa	42.56	2.00e-32	131.00
IUUC-Pop-099942	Populus trichocarpa	46.56	8.00e-72	263.00
IUUC-Ppe-101486	Prunus persica	42.26	4.00e-71	260.00
IUUC-Sit-110225	Setaria italica	71.43	8.00e-29	120.00
IUUC-Sly-111154	Solanum lycopersicum	40.86	2.00e-67	248.00
IUUC-Stu-112583	Solanum tuberosum	41.56	2.00e-68	251.00
IUUC-Sbi-114119	Sorghum bicolor	36.82	3.00e-38	151.00
IUUC-Tca-121526	Theobroma cacao	41.70	3.00e-48	184.00
IUUC-Tae-122999	Triticum aestivum	37.14	6.00e-40	157.00
IUUC-Vvi-131284	Vitis vinifera	46.46	6.00e-81	293.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence