iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014881

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000884

Gene Name

LOC100829060; BRADI_5g19850

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI5G19850	BRADI5G19850.1	BRADI5G19850.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-31	108.5	5	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ flCpIs+elM+dPv++++G+tydr+sIe+w+ ++gk tcP t+q+l++ dl+Pn+tl rli++w+++ ss
   Q: 5    PPQLFLCPISMELMEDPVTVSTGVTYDRRSIERWFFKYGKtTCPATMQHLASFDLTPNHTLSRLISSWHDRASS 78
           799********************************998888****************************99876 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MAMEPPQLFL CPISMELMED PVTVSTGVTY DRRSIERWFF KYGKTTCPAT MQHLASFDLT 60
PNHTLSRLIS SWHDRASSSS SSSSSPPMAR EKLPSLLASI ESTPFKVTAL KSLRSCMAGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCATGG AGCCTCCCCA GCTGTTCCTG TGTCCAATCT CCATGGAGCT AATGGAGGAC 60
CCCGTGACGG TGTCCACCGG CGTCACCTAC GACCGCCGCA GCATCGAGCG GTGGTTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100829060

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002928	Amborella trichopoda	41.04	3.00e-81	295.00
IUUC-Hvu-047092	Hordeum vulgare	74.13	4.00e-139	486.00
IUUC-Lpe-051020	Leersia perrieri	69.80	4.00e-137	480.00
IUUC-Mac-064665	Musa acuminata	46.73	6.00e-88	317.00
IUUC-Obr-076700	Oryza brachyantha	72.12	5.00e-140	489.00
IUUC-Ogl-077950	Oryza glaberrima	72.05	3.00e-144	503.00
IUUC-Ogu-078575	Oryza glumaepatula	71.59	8.00e-144	502.00
IUUC-Oin-079500	Oryza indica	72.05	3.00e-144	503.00
IUUC-Oni-082805	Oryza nivara	72.05	3.00e-144	503.00
IUUC-Opu-083721	Oryza punctata	71.30	2.00e-143	501.00
IUUC-Oru-084349	Oryza rufipogon	71.59	3.00e-143	500.00
IUUC-Osa-086088	Oryza sativa	71.36	7.00e-143	499.00
IUUC-Ppe-101339	Prunus persica	41.12	9.00e-67	246.00
IUUC-Sit-110629	Setaria italica	72.79	1.00e-135	475.00
IUUC-Sly-111695	Solanum lycopersicum	40.09	6.00e-74	270.00
IUUC-Stu-112376	Solanum tuberosum	40.47	5.00e-75	274.00
IUUC-Sbi-114088	Sorghum bicolor	71.69	2.00e-139	488.00
IUUC-Tae-124754	Triticum aestivum	75.00	3.00e-137	481.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence