iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076700

Ensembl Protein ID

OB04G30310.1

UniProt Accession

J3M0V6; J3M0V6_ORYBR

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB04G30310	OB04G30310.1	OB04G30310.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.20e-32	112.4	5	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ flCpIs+elM+dPv++++G+tydr+sIe+w+ ++gk tcP t+q+l++ dl+Pn+tl+r+i++w+++ ss
   Q: 5    PPPLFLCPISMELMEDPVTVATGVTYDRRSIERWFFKYGKtTCPATMQRLSSFDLTPNHTLKRVISSWLDRASS 78
           799********************************998888****************************99876 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MAMDPPPLFL CPISMELMED PVTVATGVTY DRRSIERWFF KYGKTTCPAT MQRLSSFDLT 60
PNHTLKRVIS SWLDRASSSS TADAPAPAPA SHVMARDRLP SVLAGIEETP FKATALKNLK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAATGG ATCCTCCTCC TCTGTTCCTG TGCCCGATCT CGATGGAGCT AATGGAGGAC 60
CCCGTCACGG TGGCCACCGG CGTCACGTAC GACCGCCGTA GCATCGAGCG GTGGTTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

obr:102721158

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002928	Amborella trichopoda	41.71	3.00e-88	318.00
IUUC-Bdi-014881	Brachypodium distachyon	69.82	4.00e-129	453.00
IUUC-Hvu-047092	Hordeum vulgare	75.79	3.00e-145	507.00
IUUC-Lpe-051020	Leersia perrieri	82.33	4.00e-176	609.00
IUUC-Mtr-058052	Medicago truncatula	33.64	5.00e-52	197.00
IUUC-Mac-064665	Musa acuminata	48.42	1.00e-99	355.00
IUUC-Oba-074977	Oryza barthii	87.58	7.00e-149	518.00
IUUC-Ogl-077950	Oryza glaberrima	88.60	0.00e+00	678.00
IUUC-Ogu-078575	Oryza glumaepatula	88.60	0.00e+00	678.00
IUUC-Oin-079500	Oryza indica	88.12	0.00e+00	676.00
IUUC-Oni-082805	Oryza nivara	88.12	0.00e+00	676.00
IUUC-Opu-083721	Oryza punctata	89.50	0.00e+00	692.00
IUUC-Oru-084349	Oryza rufipogon	88.36	0.00e+00	677.00
IUUC-Osa-086088	Oryza sativa	88.12	0.00e+00	676.00
IUUC-Ppe-101339	Prunus persica	43.20	4.00e-82	296.00
IUUC-Sit-110629	Setaria italica	77.48	4.00e-159	553.00
IUUC-Sly-111695	Solanum lycopersicum	41.65	6.00e-87	313.00
IUUC-Stu-112376	Solanum tuberosum	42.13	1.00e-88	318.00
IUUC-Sbi-114088	Sorghum bicolor	78.66	9.00e-160	555.00
IUUC-Tae-124754	Triticum aestivum	75.85	3.00e-144	503.00
IUUC-Tur-126771	Triticum urartu	51.90	8.00e-88	316.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence