iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116342

Ensembl Protein ID

ENSSSCP00000025981.1

UniProt Accession

I3LPF4; I3LPF4_PIG

Protein Name

Uncharacterized protein

Gene Name

TBL3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000026308.1	ENSSSCT00000026390.1	ENSSSCP00000025981.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-21	74.8	359	390
UBD/Beta-Prp	5.10e-40	137.8	254	502

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.f.sdtllvsGsdDgtikvWDl 30
           gHtd v +l+ f  ++l++s++ D +i++W++
   Q: 359  GHTDIVLALDvFrKGWLFASCAKDQSIRIWRI 390
           8********967655***************96 PP

UBD/Beta-Prp

   S: 32   gtikvwdvttgkl...lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.sgdklvsGshdr 116
           g ++vw++ +g++     +l g  +e t + + + + +++++  D+++ +++ ++ +    + g +++vl+++f   +++++v++s+  
   Q: 254  GILRVWEAASGQCvhaQPRLPGPGQELTHCALARAAGLRLSVTADHNLLLYEARSLQLQKQFAGYSEEVLDVRFLGpENSHVVVASNSP 342
           56799*****9996666689999999************************************************98699********** PP
   S: 117  tirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl...tgghtdsvyslsfdsng.kelvsgsld 201
            ++v++l+t  c   +l gh+++v  + v  +g l++s+++D+ +r+W+++ + l+      +g ht+sv  +  ++ +  +lv+gs+d
   Q: 343  CLKVFELQTSACQ--ILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWRINKAGLVACVaqgSG-HTHSVGTICCSRLKeSFLVTGSQD 428
           ************9..7**********************************88887777777466.********9888665899****** PP
   S: 202  gtvklwdlq.....................tgec...................vrtlnghtdnvksvrfspnde 235
            tvklw l                      t++c                   +  + gh++  ++v+fsp d+
   Q: 429  CTVKLWPLPealpsrstapdsgpvllqaqaTQRChdkvtahgtrqgrgrafagLGDFSGHRRGLWCVQFSPMDQ 502
           ********988887766666555555555544447777888888888888888888888889999999987765 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

RDQGVSGSCS PPLLSSYAIE RKIEPFYKGG KVQLDQTGQH LFCVCGTRVN ILDVASGAVL 60
RSLEQEDQED ITAFYLARGQ EVLGTATRAL LLAQWAWREG SIVRLWKAIH XAAMAFDPTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGACCAAG GGGTCAGTGG TTCATGCTCC CCCCCTCTTC TTTCCAGCTA TGCCATCGAG 60
CGCAAGATTG AGCCTTTCTA CAAGGGCGGG AAGGTGCAGG TACCAACGCA GGGAGGAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	29.04	3.00e-65	243.00
IUUC-Aml-002376	Ailuropoda melanoleuca	68.52	0.00e+00	940.00
IUUC-Atr-002486	Amborella trichopoda	28.31	3.00e-74	273.00
IUUC-Apl-003519	Anas platyrhynchos	44.64	2.00e-149	522.00
IUUC-Aca-004363	Anolis carolinensis	46.56	3.00e-110	391.00
IUUC-Aly-006152	Arabidopsis lyrata	25.81	2.00e-63	236.00
IUUC-Ath-006966	Arabidopsis thaliana	26.02	3.00e-61	229.00
IUUC-Ago-007746	Ashbya gossypii	24.88	4.00e-45	176.00
IUUC-Acl-008009	Aspergillus clavatus	25.34	2.00e-46	180.00
IUUC-Afl-008681	Aspergillus flavus	24.48	6.00e-44	172.00
IUUC-Afu-008798	Aspergillus fumigatus	25.71	8.00e-40	159.00
IUUC-Ani-009278	Aspergillus nidulans	23.99	1.00e-37	152.00
IUUC-Ang-009640	Aspergillus niger	26.00	3.00e-47	183.00
IUUC-Aor-010160	Aspergillus oryzae	24.48	7.00e-44	172.00
IUUC-Ate-010320	Aspergillus terreus	23.71	1.00e-44	174.00
IUUC-Ame-010930	Astyanax mexicanus	47.54	1.00e-43	169.00
IUUC-Bgr-012054	Blumeria graminis	28.62	3.00e-52	199.00
IUUC-Bta-012611	Bos taurus	68.35	0.00e+00	933.00
IUUC-Bci-013797	Botrytis cinerea	27.30	2.00e-55	210.00
IUUC-Bdi-014384	Brachypodium distachyon	30.82	1.00e-78	287.00
IUUC-Bol-016483	Brassica oleracea	27.86	8.00e-65	241.00
IUUC-Bra-017798	Brassica rapa	28.43	3.00e-66	246.00
IUUC-Cel-018664	Caenorhabditis elegans	25.52	4.00e-61	229.00
IUUC-Cja-019092	Callithrix jacchus	68.55	0.00e+00	961.00
IUUC-Cfa-021040	Canis familiaris	68.80	0.00e+00	937.00
IUUC-Cpo-022529	Cavia porcellus	67.21	0.00e+00	937.00
IUUC-Csa-024205	Chlorocebus sabaeus	68.92	0.00e+00	967.00
IUUC-Cin-025560	Ciona intestinalis	32.96	1.00e-115	410.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	26.75	1.00e-55	211.00
IUUC-Cne-027082	Cryptococcus neoformans	26.16	3.00e-51	196.00
IUUC-Dre-028138	Danio rerio	45.20	2.00e-153	536.00
IUUC-Dno-029914	Dasypus novemcinctus	56.37	5.00e-174	604.00
IUUC-Dor-030685	Dipodomys ordii	67.63	4.00e-165	575.00
IUUC-Dse-031429	Dothistroma septosporum	24.81	2.00e-37	150.00
IUUC-Dme-031995	Drosophila melanogaster	26.05	2.00e-59	224.00
IUUC-Ete-033086	Echinops telfairi	62.36	5.00e-130	458.00
IUUC-Eca-034354	Equus caballus	69.11	0.00e+00	951.00
IUUC-Eeu-034832	Erinaceus europaeus	69.55	2.00e-150	525.00
IUUC-Fca-036136	Felis catus	63.82	0.00e+00	852.00
IUUC-Fal-036859	Ficedula albicollis	47.69	0.00e+00	642.00
IUUC-Fox-037863	Fusarium oxysporum	27.72	4.00e-51	196.00
IUUC-Fso-038389	Fusarium solani	27.52	1.00e-57	218.00
IUUC-Gmo-038711	Gadus morhua	44.14	6.00e-167	580.00
IUUC-Ggr-039820	Gaeumannomyces graminis	26.68	4.00e-56	213.00
IUUC-Gga-040263	Gallus gallus	47.69	0.00e+00	669.00
IUUC-Gac-041291	Gasterosteus aculeatus	44.68	2.00e-179	622.00
IUUC-Gma-044026	Glycine max	29.96	1.00e-77	284.00
IUUC-Ggo-044693	Gorilla gorilla	67.96	0.00e+00	956.00
IUUC-Hsa-046048	Homo sapiens	68.34	0.00e+00	960.00
IUUC-Hvu-047608	Hordeum vulgare	30.00	6.00e-77	282.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	68.71	0.00e+00	973.00
IUUC-Kpa-049209	Komagataella pastoris	25.80	7.00e-51	195.00
IUUC-Lch-050085	Latimeria chalumnae	47.01	2.00e-170	592.00
IUUC-Lpe-050945	Leersia perrieri	30.23	4.00e-77	282.00
IUUC-Loc-052679	Lepisosteus oculatus	47.96	0.00e+00	656.00
IUUC-Laf-053685	Loxodonta africana	65.06	0.00e+00	870.00
IUUC-Mcc-055861	Macaca mulatta	68.80	0.00e+00	972.00
IUUC-Meu-056820	Macropus eugenii	62.53	2.00e-136	479.00
IUUC-Mor-057234	Magnaporthe oryzae	25.45	5.00e-49	189.00
IUUC-Mpo-057456	Magnaporthe poae	26.56	9.00e-46	178.00
IUUC-Mtr-058122	Medicago truncatula	29.86	3.00e-78	286.00
IUUC-Mla-058980	Melampsora laricipopulina	25.53	4.00e-48	186.00
IUUC-Mga-060080	Meleagris gallopavo	46.69	0.00e+00	665.00
IUUC-Mvi-060338	Microbotryum violaceum	31.48	2.00e-79	290.00
IUUC-Mmr-060762	Microcebus murinus	69.30	0.00e+00	929.00
IUUC-Mdo-061975	Monodelphis domestica	55.68	0.00e+00	738.00
IUUC-Mmu-064038	Mus musculus	66.62	0.00e+00	931.00
IUUC-Mac-065189	Musa acuminata	26.71	5.00e-71	262.00
IUUC-Mpu-066526	Mustela putorius furo	66.33	0.00e+00	905.00
IUUC-Mlu-067716	Myotis lucifugus	68.04	0.00e+00	972.00
IUUC-Nfi-068474	Neosartorya fischeri	25.67	1.00e-41	165.00
IUUC-Ncr-068826	Neurospora crassa	24.08	5.00e-38	152.00
IUUC-Nle-069832	Nomascus leucogenys	69.08	0.00e+00	970.00
IUUC-Opr-071183	Ochotona princeps	62.26	0.00e+00	830.00
IUUC-Ont-072371	Oreochromis niloticus	44.90	2.00e-175	608.00
IUUC-Oan-073491	Ornithorhynchus anatinus	52.63	0.00e+00	649.00
IUUC-Oba-075963	Oryza barthii	30.38	2.00e-71	264.00
IUUC-Obr-076173	Oryza brachyantha	30.47	1.00e-75	278.00
IUUC-Ogl-077692	Oryza glaberrima	30.38	2.00e-71	263.00
IUUC-Ogu-078965	Oryza glumaepatula	30.38	2.00e-71	264.00
IUUC-Oin-079708	Oryza indica	30.38	5.00e-72	265.00
IUUC-Olo-080679	Oryza longistaminata	30.53	2.00e-69	256.00
IUUC-Oni-082960	Oryza nivara	30.23	1.00e-71	265.00
IUUC-Opu-083282	Oryza punctata	30.91	6.00e-66	245.00
IUUC-Oru-085224	Oryza rufipogon	30.38	1.00e-71	264.00
IUUC-Osa-085320	Oryza sativa	30.38	1.00e-71	264.00
IUUC-Ola-086370	Oryzias latipes	39.00	5.00e-89	322.00
IUUC-Olu-087814	Ostreococcus lucimarinus	26.19	2.00e-36	147.00
IUUC-Oga-088458	Otolemur garnettii	67.79	0.00e+00	983.00
IUUC-Oar-090032	Ovis aries	63.79	0.00e+00	675.00
IUUC-Ptr-090749	Pan troglodytes	67.58	0.00e+00	941.00
IUUC-Pan-091691	Papio anubis	65.20	0.00e+00	900.00
IUUC-Psi-093200	Pelodiscus sinensis	46.69	0.00e+00	658.00
IUUC-Pma-094165	Petromyzon marinus	38.05	2.00e-92	333.00
IUUC-Pno-095048	Phaeosphaeria nodorum	25.89	3.00e-40	160.00
IUUC-Ppa-095336	Physcomitrella patens	33.14	1.00e-82	301.00
IUUC-Pfo-096132	Poecilia formosa	44.06	6.00e-173	600.00
IUUC-Pab-097855	Pongo abelii	67.92	0.00e+00	954.00
IUUC-Pop-099858	Populus trichocarpa	28.89	4.00e-67	249.00
IUUC-Pca-100232	Procavia capensis	68.77	4.00e-113	402.00
IUUC-Ppe-101665	Prunus persica	29.52	3.00e-73	269.00
IUUC-Pva-102178	Pteropus vampyrus	66.67	0.00e+00	935.00
IUUC-Pgr-103288	Puccinia graminis	24.34	6.00e-43	169.00
IUUC-Ptt-103808	Puccinia triticina	26.89	7.00e-45	175.00
IUUC-Pte-104205	Pyrenophora teres	24.61	6.00e-46	179.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	25.22	2.00e-40	160.00
IUUC-Rno-105617	Rattus norvegicus	66.08	0.00e+00	926.00
IUUC-Sce-106281	Saccharomyces cerevisiae	23.96	2.00e-47	184.00
IUUC-Sha-107378	Sarcophilus harrisii	55.04	0.00e+00	724.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	29.88	3.00e-60	226.00
IUUC-Spo-108361	Schizosaccharomyces pombe	28.57	2.00e-50	193.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	27.19	3.00e-55	209.00
IUUC-Smo-109257	Selaginella moellendorffii	32.26	3.00e-83	303.00
IUUC-Sit-110258	Setaria italica	28.55	1.00e-75	278.00
IUUC-Sly-111521	Solanum lycopersicum	30.75	1.00e-76	281.00
IUUC-Sar-113586	Sorex araneus	67.82	6.00e-45	175.00
IUUC-Sbi-114768	Sorghum bicolor	29.07	2.00e-77	283.00
IUUC-Sre-115159	Sporisorium reilianum	27.88	7.00e-45	176.00
IUUC-Tgu-117320	Taeniopygia guttata	45.83	3.00e-178	618.00
IUUC-Tru-118024	Takifugu rubripes	43.35	2.00e-168	586.00
IUUC-Tni-119971	Tetraodon nigroviridis	43.53	7.00e-170	590.00
IUUC-Tca-121248	Theobroma cacao	29.97	1.00e-74	274.00
IUUC-Tre-122079	Trichoderma reesei	28.52	1.00e-48	188.00
IUUC-Tvi-122554	Trichoderma virens	28.75	4.00e-50	192.00
IUUC-Tae-125845	Triticum aestivum	30.18	1.00e-78	287.00
IUUC-Tur-126436	Triticum urartu	31.95	5.00e-58	218.00
IUUC-Tme-126942	Tuber melanosporum	28.93	4.00e-46	179.00
IUUC-Tbe-128000	Tupaia belangeri	92.08	1.00e-52	201.00
IUUC-Ttr-128964	Tursiops truncatus	66.84	0.00e+00	922.00
IUUC-Uma-129473	Ustilago maydis	27.84	2.00e-52	201.00
IUUC-Vda-129749	Verticillium dahliae	25.34	6.00e-41	162.00
IUUC-Vvi-131511	Vitis vinifera	28.37	3.00e-69	256.00
IUUC-Xtr-132816	Xenopus tropicalis	45.57	7.00e-173	600.00
IUUC-Xma-133672	Xiphophorus maculatus	44.18	3.00e-178	619.00
IUUC-Yli-134602	Yarrowia lipolytica	28.21	5.00e-65	242.00
IUUC-Zma-135559	Zea mays	28.50	1.00e-68	254.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence