iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014577

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000881

Gene Name

LOC100841820; BRADI_2g53560

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI2G53560	BRADI2G53560.1	BRADI2G53560.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.70e-09	36.5	140	182

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f dg  ++vlp CgH fh  C+ +w         +++CP+Cr
   Q: 140  CAICLGEFADGdkVRVLPrCGHEFHVRCVDAW------LVSHDSCPTCR 182
           ********55444999999*************......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MGTHARSMSW YMGGPPGSPA PPGSSGGGEA QRALSSSSGS AGGGSDASFD TNMVIILAAL 60
LFALLFALGL NSLARCVIRW ARRAASSGEG GVDEEAAAVQ GGGGGGGGGM SSGKKKRTLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGAGAGCCG CTACCACGTC TCCGTCCCTG TGCAACACAT ACCCGTACCT GTACCGCCGG 60
CGCATAATTG CCGGGCGGAA AGCGTGGTGG TGGTTACTAA GCTCGATCGA GACTTCGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100841820

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-050757	Leersia perrieri	58.64	1.00e-35	142.00
IUUC-Oba-075276	Oryza barthii	59.62	6.00e-27	112.00
IUUC-Ogl-077815	Oryza glaberrima	80.26	7.00e-29	119.00
IUUC-Ogu-078614	Oryza glumaepatula	73.61	8.00e-26	108.00
IUUC-Oin-079303	Oryza indica	81.08	2.00e-28	117.00
IUUC-Ome-081438	Oryza meridionalis	82.09	5.00e-25	106.00
IUUC-Oni-082553	Oryza nivara	73.61	8.00e-26	108.00
IUUC-Opu-083997	Oryza punctata	76.39	2.00e-25	108.00
IUUC-Oru-084180	Oryza rufipogon	73.61	8.00e-26	108.00
IUUC-Osa-085682	Oryza sativa	81.08	2.00e-28	117.00
IUUC-Sit-110370	Setaria italica	62.43	1.00e-23	102.00
IUUC-Sbi-114132	Sorghum bicolor	60.36	6.00e-28	116.00
IUUC-Tae-124599	Triticum aestivum	62.63	1.00e-34	138.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence