iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114628

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G043500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g003830	Sb10g003830.1	Sb10g003830.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.00e-09	36.9	124	166

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl      d ++ lp CgH+fha C+ +w       + +++CP Cr
   Q: 124  CAICLGLVaiGDAVRRLPtCGHLFHAACIDQW------LRAHATCPMCR 166
           ****99777766699999**************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MFTPGGGAAA LPGNPPSPAA SRRTNGYAYE SRVLIALLLA SALMFFLTYQ LFGPAAATAV 60
VVLFLVFALA AHRVRISRSF PFLHLSTRSL PDGEPGMDAV ATSALPAAFR YKREDAAATG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTCACCC CGGGCGGCGG CGCCGCCGCG TTGCCCGGCA ACCCGCCCAG CCCGGCGGCG 60
AGCCGCCGCA CCAATGGCTA CGCCTACGAG AGCCGAGTGC TCATCGCTCT GCTCCTCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_10g003830

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dme-031973	Drosophila melanogaster	37.50	5.00e-14	73.20
IUUC-Lpe-051088	Leersia perrieri	72.34	7.00e-19	86.30
IUUC-Ogu-078698	Oryza glumaepatula	58.06	7.00e-28	115.00
IUUC-Oin-079827	Oryza indica	53.66	3.00e-28	118.00
IUUC-Ome-081139	Oryza meridionalis	53.42	7.00e-31	125.00
IUUC-Oni-083011	Oryza nivara	53.85	1.00e-28	118.00
IUUC-Opu-083309	Oryza punctata	77.46	2.00e-28	117.00
IUUC-Pgr-103360	Puccinia graminis	41.51	2.00e-11	59.70
IUUC-Sit-110185	Setaria italica	65.06	9.00e-36	142.00
IUUC-Vda-129745	Verticillium dahliae	31.25	7.00e-11	59.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence