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Tag Content
iUUCD ID IUUC-Olo-080540
Ensembl Protein ID KN538866.1_FGP025
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
KN538866.1_FG025 KN538866.1_FGT025 KN538866.1_FGP025
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 8.40e-27 92.7 148 184
UBD/Beta-Prp 8.80e-45 153.7 31 309
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
    H d vt+la +d ll s+s+D +ikvW+l ++++
   Q: 148 HVDAVTALAVsPDgALLYSASWDRSIKVWRLPGFRCV 184
    99*********99999**************9888887 PP
   


   UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl..............lrslsgheaevtavkfspdgkilvtgseDrtikvw. 79
    +t+kgh ++ ++ + + d++ l +s dg+i++w ++ ++ + ++ v+++ +g +l+++++D+ i+ w
   Q: 31 ATIKGHSSASAYVSALAVDGDSLYIASSDGSIRLWALDAARRsqeeqqeddgcsssSTTVADTDSSVKSLLATGNGGLLLSSHQDGKIRAWr 122
    6888998888887777778888888888***********888666667777766655555666666*************************8 PP
   S: 80 ............dlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDr 159
    l + t+ h d v++l++sp+g l s+s+dr i+vw l+ c+e++ + hd+++n ++v+pdg + +Gs+D+
   Q: 123 agsrrrdggtrpQLIRRHRRCTWVHHVDAVTALAVSPDGALLYSASWDRSIKVWRLPGFRCVESIAAAHDDAINALAVSPDG-RVYTGSADK 213
    8777665555555557777777789*******************************************************55.678****** PP
   S: 160 tvrlWdl....ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq.....tgecvrtlnghtdnvksvrfspnderlvsgss 242
    +++ W + l+ t++ h ++v+ l++ ngk l sg++d++v +w+ e tl+gh + ++++++ +e++ sgs+
   Q: 214 KIKAWTRgpgqRKHALVGTMER-HRSAVNALALGANGKVLYSGACDRSVVVWESAgggdgGMEATGTLRGHARAILCLAAA--GELVCSGSA 302
    *******888888888888888.*******************************999977556699***************..********* PP
   S: 243 DgsiriW 249
    D+++r+W
   Q: 303 DRTVRVW 309
    ******* PP
   

Organism Oryza longistaminata
Protein Sequence
(Fasta)
MSLASQPSLR SLPSLDVHDL NTSPSLHQCI ATIKGHSSAS AYVSALAVDG DSLYIASSDG 60
SIRLWALDAA RRSQEEQQED DGCSSSSTTV ADTDSSVKSL LATGNGGLLL SSHQDGKIRA 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Olo-080540|E3,WD_repeat;UBD,Beta-Prp|Oryza longistaminata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTCGCTCG CGTCGCAGCC GAGCCTCCGT TCCCTTCCTT CCCTGGACGT CCATGACCTG 60
AACACAAGCC CTTCGCTCCA CCAATGCATC GCCACGATCA AAGGCCACTC GTCGGCGTCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Olo-080540|E3,WD_repeat;UBD,Beta-Prp|Oryza longistaminata
Please wait for a moment...
Sequence Source Ensembl
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001063 Aegilops tauschii 34.95 4.00e-30 125.00
IUUC-Atr-002783 Amborella trichopoda 39.95 1.00e-62 233.00
IUUC-Aly-006280 Arabidopsis lyrata 46.42 1.00e-66 246.00
IUUC-Ath-006722 Arabidopsis thaliana 48.92 1.00e-79 289.00
IUUC-Bdi-014607 Brachypodium distachyon 61.15 2.00e-116 411.00
IUUC-Bol-016325 Brassica oleracea 47.70 2.00e-75 275.00
IUUC-Bra-018099 Brassica rapa 48.23 5.00e-85 307.00
IUUC-Gma-043330 Glycine max 47.13 9.00e-96 342.00
IUUC-Hvu-047304 Hordeum vulgare 60.27 9.00e-115 405.00
IUUC-Lpe-050736 Leersia perrieri 74.69 8.00e-157 545.00
IUUC-Mtr-058389 Medicago truncatula 42.89 1.00e-79 289.00
IUUC-Mac-064538 Musa acuminata 54.15 9.00e-100 355.00
IUUC-Oba-075391 Oryza barthii 83.33 1.00e-138 484.00
IUUC-Obr-076628 Oryza brachyantha 75.45 5.00e-164 569.00
IUUC-Ogl-076961 Oryza glaberrima 89.80 2.00e-169 587.00
IUUC-Ogu-078745 Oryza glumaepatula 89.33 2.00e-177 613.00
IUUC-Oin-079355 Oryza indica 89.80 3.00e-169 587.00
IUUC-Ome-081476 Oryza meridionalis 92.25 1.00e-169 588.00
IUUC-Oni-082952 Oryza nivara 89.58 3.00e-169 586.00
IUUC-Opu-083726 Oryza punctata 85.57 4.00e-173 599.00
IUUC-Oru-084480 Oryza rufipogon 89.55 2.00e-168 584.00
IUUC-Osa-086252 Oryza sativa 89.55 1.00e-168 584.00
IUUC-Ppa-095765 Physcomitrella patens 38.69 4.00e-57 214.00
IUUC-Pop-099181 Populus trichocarpa 46.06 3.00e-84 304.00
IUUC-Ppe-101853 Prunus persica 46.30 4.00e-91 327.00
IUUC-Smo-108947 Selaginella moellendorffii 37.93 2.00e-31 129.00
IUUC-Sit-109950 Setaria italica 68.24 1.00e-115 408.00
IUUC-Sly-111917 Solanum lycopersicum 45.36 5.00e-87 313.00
IUUC-Stu-112480 Solanum tuberosum 44.92 2.00e-79 288.00
IUUC-Sbi-114568 Sorghum bicolor 64.84 3.00e-125 440.00
IUUC-Tca-121089 Theobroma cacao 46.12 4.00e-95 340.00
IUUC-Tae-124515 Triticum aestivum 60.38 2.00e-109 388.00
IUUC-Tur-126500 Triticum urartu 60.43 7.00e-112 396.00
IUUC-Vvi-131635 Vitis vinifera 47.13 3.00e-94 337.00
Created Date 25-Jun-2017

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