iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051074

Ensembl Protein ID

LPERR06G23470.1

UniProt Accession

A0A0D9WUB5; A0A0D9WUB5_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR06G23470	LPERR06G23470.1	LPERR06G23470.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-23	83.9	271	335

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p +flCpIsle+M+dP       ty+r+sI+kwl+ g++tcP+t+qpl++ +l Pn +l++li +wce+n+
   Q: 271  IPNDFLCPISLEIMTDP-------TYERRSIQKWLDAGQRTCPKTQQPLAHLSLAPNFALKNLIMQWCEKNK 335
           799**************.......8********************************************997 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MLPATTTASM SAEAEPSGRQ LSDGDLLDDL LSTANSARAF KEFRQAHRKD CLNLLRQLQL 60
LLPLVHDIRD SPSTSPPLSD DAYRRLALLG RAFHAARRLL RCCHDGSKIF LTLESDAVTA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGCCGG CGACGACGAC GGCGAGCATG TCGGCGGAGG CGGAGCCATC GGGGCGTCAG 60
CTGTCGGACG GCGACCTCCT TGACGACCTC CTGTCGACGG CGAACTCCGC CCGCGCGTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014836	Brachypodium distachyon	77.99	0.00e+00	927.00
IUUC-Oba-075907	Oryza barthii	83.73	0.00e+00	949.00
IUUC-Obr-076853	Oryza brachyantha	85.91	0.00e+00	853.00
IUUC-Ogl-077690	Oryza glaberrima	83.73	0.00e+00	949.00
IUUC-Ogu-078150	Oryza glumaepatula	83.73	0.00e+00	949.00
IUUC-Oin-079405	Oryza indica	80.86	0.00e+00	894.00
IUUC-Olo-081047	Oryza longistaminata	83.17	0.00e+00	941.00
IUUC-Ome-081561	Oryza meridionalis	84.05	0.00e+00	961.00
IUUC-Oni-082780	Oryza nivara	83.73	0.00e+00	949.00
IUUC-Opu-083836	Oryza punctata	84.69	0.00e+00	976.00
IUUC-Oru-084958	Oryza rufipogon	83.73	0.00e+00	949.00
IUUC-Sit-110533	Setaria italica	77.00	0.00e+00	918.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence